Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3344 |
Symbol | |
ID | 5540843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4363320 |
End bp | 4364681 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640895462 |
Product | hypothetical protein |
Protein accession | YP_001433412 |
Protein GI | 156743283 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTCGT TCACGCGCGT CGTCCTCATC ACAATCTGTG TAACGTCGCT GGCGTTCTCA TTGCTCACGG CATGCGTTGC AACCCCGGTG GTCGTGACTG CACCACTGCC AGATGGGGCT GTTCCGACTG CGGCCATCTG GAGTCAGGCG CCATTGCCGA AACAGGTTAC GCCAGAGCGT ATGCCGGTCT TCTCACGTGC GAATGTGACA CCTTCACCAA CACTGCAATC CATTCCCACA CCGCTGCCGA CCCCGATTCC TCCAACGCTG CAACCGTTCG GTCCAGGGGG TATGCCACAT CCGCTGCGTG TCCGGCGATT GCAGTTCGGC GTACACGCCC ATCTATTCTG GACCGACCGT GCCACGCCGT TGCGCCTGGC GAAGGATGCG GGTTTTGGCT GGATTCGTCA GCAGATCCAC TGGAAGGACC AGGAAGGTCC GCCTGGCTTC TACGCTTGGG GCGCAGAACT CGACGCGCTG ATCGCCGACG TCAACGCGCG TGGTCTGAAC CTGATGATCT CCATCGTCCG GTCACCACAT TTTTACGGGC GCAGCGGCAG CGACGGATTG CCGGAAAACC CCGAGACGTT GGGAAACTTC GTGGCGGCGC TGGCGCAGCG GTACAAAGGA CGCATTCACG CTATCCAGAT CTGGAATGAA CAGAACCTCG CATACGAAAA TGGCGGCTAC GTTTCGACCG ACGATGCCCG GCATTATGTC GAAATCCTCA AGGTCGCATA CCAACGCATC AAAGACGTCG ATCCGACGAT CATCGTGGTC AGCGGCGCGC CGGCTTCGAC AGCGGTTGAC AGCCCCGGCG TTGCGATCTC CGACATTCGC TACTACAGTG CCATGTTCGC CTATGAAAAC GGCATTATTC GGAATTATGT CGATGCACTC GGCGTCCATC CCGGCGGTTC CGCCAACCCG CCGGAGACCT TCTGGCCCGA TGCGCCGAGC CAGGCGCAGG GATGGACCGA GCATCCAACC TTCTACTTCC GCAATGTGGA ACGTATTCGT CGCCTGATGG AAGAATATGG GCTGGCGGAT ATTCCGATAT GGATTACGGA ATTTGGTTGG GCGACGCGCA ACACCACGCC GGGATTCGAG TTCGGCAACC AGGTATCATA CGAGCAACAG GCGCGGTACA TCGTAGGCGC GATGGAATGG ACCGCCGCGC GGTATCCGTG GGTCGATGCG ATGTTCCTGT GGAACCTGAA TTTTGCTCCG CTGCGCGCAC GCAATGGCGA ACCCTGGCAC GAACAAGCGT CGTTCAGCAT CATCAACGCC GATTACACGC CGCGCCCGGC ATATTGGGCG ATCCAGCAGT ACATTGTGCA GTATAATGCC CGCCGTGAAT GA
|
Protein sequence | MASFTRVVLI TICVTSLAFS LLTACVATPV VVTAPLPDGA VPTAAIWSQA PLPKQVTPER MPVFSRANVT PSPTLQSIPT PLPTPIPPTL QPFGPGGMPH PLRVRRLQFG VHAHLFWTDR ATPLRLAKDA GFGWIRQQIH WKDQEGPPGF YAWGAELDAL IADVNARGLN LMISIVRSPH FYGRSGSDGL PENPETLGNF VAALAQRYKG RIHAIQIWNE QNLAYENGGY VSTDDARHYV EILKVAYQRI KDVDPTIIVV SGAPASTAVD SPGVAISDIR YYSAMFAYEN GIIRNYVDAL GVHPGGSANP PETFWPDAPS QAQGWTEHPT FYFRNVERIR RLMEEYGLAD IPIWITEFGW ATRNTTPGFE FGNQVSYEQQ ARYIVGAMEW TAARYPWVDA MFLWNLNFAP LRARNGEPWH EQASFSIINA DYTPRPAYWA IQQYIVQYNA RRE
|
| |