| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3275 |
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| Symbol | |
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| ID | 5540773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4251750 |
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| End bp | 4253009 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895393 |
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| Product | von Willebrand factor type A |
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| Protein accession | YP_001433344 |
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| Protein GI | 156743215 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.112036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGCG AGGTTGCCAT TCGCGCATCG CTGGCGCGTC CGTATCTGAC GGCAGCGACG
ATGCCGCAGG TTGCGTATCT GCTGATCGAA GTCACGCCTG GTCAGATCAT GACACAAGTG
CGAGCGCCGG TCAATGTCTG TTTTGTCATT GATCGGAGCG GCTCGATGAA GGGCGAAAAG
ATCGACCGGG TGCGACGCGC GACGATTCGC GCAATTGAGA TGCTCGACGC ACAGGATGTC
GTCTCGGTCG TGATCTTCGA TCATCGCACC GAGGTCCTGA TCCCTGCCAC GCCGGTCGCC
AAACCCGCAG AACTGGCTGA TCGCGTCAAT CGTGTGCGCG ATAGCGGCGG AACCCGGATT
GCGCCGGCTA TCGAGGCAGG TCTGCGCGAG ATCGATAAAG GACCGTCGCA CATGGTGCGT
CGCCTCATCC TGCTCACTGA CGGTCAGACC GAGAGCGAGT CCGACTGTCT GCGACGCGCC
GAGGATGCCG GACGGCGCAA CGTGCCGATC ACGGCGCTTG GCGTCGGCAA GGACTGGAAC
GAGGATCTGT TGATCGAGAT GGCGAATCGT TCGGGAGGAA CGGCAGACTA TATTGATCGT
CCAGAAAAGA TCGTCGATTA CTTCCAGAAT ACCATCCAGC GCGCGCAGGC GACGACGGTG
CAGAATGCGA ACGTGACGCT ACGATTTGTG CAGGGAGTAT TGCCGCGCGC CGTGTGGCAG
GTCTACCCGC TTATCACCAA CCTCGGTTAC CGCCCCATTT CTGATCGCGA CGTCAGTGTG
CCGCTTGGTG AACTGGAAAC CGGGAGCGGA CGCACCCTGC TTGTCGAAGT GCTGGTCGAG
CCGCGACCAT CCGGTGAGTA TCGCATCGCT CAGGTCGAGG TAAGTTATGA TATTCCGCTG
CTGAATCTGC ACGGTGAGAA GAGTCGCGCC GACATCATGC TTTCCTTTAC GACTGATGCC
GGGCTTGCTG CGCAGGTGAA TCCGAATGTG ATGAATATCG TCGAGAAAGT CAGCGCCTTC
AAGTTGCAGA CGCGCGCCTT GCAGGACCTC GCTGCCGGCG ATGTCGCGGG AGCGACCCAG
AAGCTGCAAA GCGCCGTGAC CCGGTTGCTC AACCAGGGCG AAGTCGAACT TGCGCAGACG
ATGGAGCGTG AGATTCAGCA TCTGCAACAG ACCGGCAAAC TTTCCAGCGA AGGGCAGAAG
ACGATCAAGT TCGGCGTGCA GAAGACGGTG CGGTTGAGCG ACATCAAGCA GGAGGAATAG
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| Protein sequence | MAGEVAIRAS LARPYLTAAT MPQVAYLLIE VTPGQIMTQV RAPVNVCFVI DRSGSMKGEK
IDRVRRATIR AIEMLDAQDV VSVVIFDHRT EVLIPATPVA KPAELADRVN RVRDSGGTRI
APAIEAGLRE IDKGPSHMVR RLILLTDGQT ESESDCLRRA EDAGRRNVPI TALGVGKDWN
EDLLIEMANR SGGTADYIDR PEKIVDYFQN TIQRAQATTV QNANVTLRFV QGVLPRAVWQ
VYPLITNLGY RPISDRDVSV PLGELETGSG RTLLVEVLVE PRPSGEYRIA QVEVSYDIPL
LNLHGEKSRA DIMLSFTTDA GLAAQVNPNV MNIVEKVSAF KLQTRALQDL AAGDVAGATQ
KLQSAVTRLL NQGEVELAQT MEREIQHLQQ TGKLSSEGQK TIKFGVQKTV RLSDIKQEE
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