Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3235 |
Symbol | |
ID | 5540733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4204026 |
End bp | 4204886 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895356 |
Product | abortive infection protein |
Protein accession | YP_001433307 |
Protein GI | 156743178 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.636961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCTG TGGCGCAGGG TCATCCGCCG AGTCGCGGCC TGATCCATCA CAATCCAATC GTAGCCTACT TCCTGATCGC CTATGCTTTC TCGTGGCTGC TCGGCGGCGT ACTGATCGCC GGTTATCACG GTCTCGTGAT GGCGCCGACG TGGTTGCACT ATGTGAGCGC GTTTGGTCCG ATGGTTGCGG CGATAGTCGT CACCGCTGCG CGCGATGGGC GCGCAGGTCT GGCGGAATTG TGGCAGCGTG TCATTCGTGC CGATGTCGGT CTGCGCTGGT GGCTCGTCGC GCTTGGAACG CCGCTTGCAC TTGGTGTTGT CGCAGCCCTG GTCTCTACAT TCGAGCAAGG CGCGCTGCCG GACGTTGCGT TATTTGGCGA GGTGGACTAT CTGGGAAACA TTGGCGTGCT GGCGGCGCTG GGGTTATGGA TTGCAACCTA TGGGTTCGGG GAAGAGATCG GGTGGCGCGG TTTTGCGCTG CACCGGCTGC AATCCGGCGG ATGGATTCGC GCTGCTGTGA TCATTGGCGT GCTGTGGGGA GCGTGGCATC TGCCGTACTT CTTCTACAAG GACAATTTCA TCGCTCTCGG CATGGGCGGC TTTGTGGGTT ATCTGATCAG CATTGTGATG GGATCGATCC TGTTGGCGTG GATCTATCGC GGGAGCGGGA ACAGCATTCT AATGGTCGCC CTGTGGCACG GGACGTTCGA CTTTGTCAGC GCCTCGCCGA TTGCGGCAGG GAGCGCCAAT GCGGTGATCA GCGTCGTTGT GATCACATGG GTGCTCGTCA TTCTGTGGCA GGCGAAGATC AGTCAATCGT CACCACCCGG TACTGAAGCG TTGCATCCAC CAGATGAATA G
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Protein sequence | MPAVAQGHPP SRGLIHHNPI VAYFLIAYAF SWLLGGVLIA GYHGLVMAPT WLHYVSAFGP MVAAIVVTAA RDGRAGLAEL WQRVIRADVG LRWWLVALGT PLALGVVAAL VSTFEQGALP DVALFGEVDY LGNIGVLAAL GLWIATYGFG EEIGWRGFAL HRLQSGGWIR AAVIIGVLWG AWHLPYFFYK DNFIALGMGG FVGYLISIVM GSILLAWIYR GSGNSILMVA LWHGTFDFVS ASPIAAGSAN AVISVVVITW VLVILWQAKI SQSSPPGTEA LHPPDE
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