| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3210 |
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| Symbol | |
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| ID | 5540708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4176061 |
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| End bp | 4178190 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895331 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433282 |
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| Protein GI | 156743153 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0565675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.603681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCCA CCGTGTCTGA GGCGCGCGCC TCCCCGCTTG CAACGACCTG CGCGCTGCTG
GCGCTGTTGG CGCTAGCGGG AGTCGTGTTG CGTCTCTGGT TTATCAGCGT CAGCCCGCTC
GATCCGCGCT ACTCCAATGC CGATGATGGC GACTACTACC GGCGGGCGCT GCGGTTTGCC
GTAACCGGCG CGTATGTCGA TGACGCCTGG CTCATTCGCC CGCCGCTGCA TGTGTTCTTT
TTTGCGCTCT GGCTGCGACT GGCGCTGATC CTGGGCATTC CTCAGCAAGG AGTGCTGTTC
GTGCAACTGG CGCAGACGGC GCTGGCGGCG CTGATGCCGC TGATCGGGTA CGATCTGGCG
CGGCGTTTGT TCGGCAGCGC GCGCGCCGGT CTGTTGTTCG CCGGGTTCTT GGCGCTCTGG
CATCCACTGG TCGAGCAGAC AACCGTGCTG TTCAGCGAGC ACCTCTACCT GTTCCTGTTT
GTGCTCCATC TCTGGCTGCT GGTGCGCTAC GACCAGGAAG GGCGATTGCG CGACCTGGCG
CTGGCGGGTG TGGCGCTTGG CGCAGCGGCG TTGACACGCT CACCGGCGTT GTACGCAGGT
ATGTTCGTTG TCGGGTGGCT GGCGGTACGC GCGCTGACAG TCGCCCAACC TGATATGGCG
TCGCGTTGGG AAGCGGTGAA AGCAGCGATC GCGCCGGCGA TTGTCGTCAT CGCGGCATGT
CTGGCAATTG TCGCACCATG GACCATGCGC AACTACCTCA TGTATGGTCA TCTGATTCCG
GTCGATACGC TGGGGCAGAT CAATCTCTGG CTCGATCTCG ACGATGTGGC GCGGCGGAAT
GAACACATCG AAACCCTGCG GCGTATGCCG CAGTCGGAGC GCCACATCTA CGCCCTCGAA
CGCGCGCGTG AGATCCTGGC TGCCGATCCG CTGCGCCCGT TCCGCCCGAT GTGGGATACC
TTCCGTCATA TCTGGAAGGC GCAATTCATT GAGGATTACT TTGTCAAGCA GAGTTTCTTC
ACCCGACCGC TGCGCGAAAC GGCGCCACTC GGTCTGGCAG GCGATCTGAT CTGGCTGACG
TTCACTACCG CAGGACTCGC CGGGCTTGCG GGACAGGCGC GCGAAGGAGT TCATTTCCGG
CTGTTTTTCC TGGCGTGGAT CGGCTACTCG TTGCTGACCG TGCTCATCTT CCATGTCGAA
CCGCGCTACC TGCTGCCGCT GTGGGTGATG ATCGCGCTGT ACGGTGCGGG AATGGCGACC
GCGCGCTGGA ACGGGGCGCG CGCGACGCCG CGCCTGGCGC TTCAGGCGGC AATCGTGGCG
ACGTTCTTTG GGTTGCTGTT GACCTACCGT GACTACCCGG CGATCATCAG CAGCGGCGTC
GCGCGCGAGC GCGCCATGAT TGCCGGTCTG TCGGCGTATC AGGCTCACGA TTATCCTGCG
GCGGAACAGG CATTCCGCGC CGCACTCGCC GCACAGCCGC GTTTTGTCGA TGCGCAGGTG
CATCTGGCGC TGGCGCTGGC GGCGCAACAG CGCTACGACG AGGCGCTGGC GCTGATCCGG
CGCAACAGTT CGCGCCATGC CGAACTGGTG TTTGGCGCAC TGCTGCGCGA CACCGGCAAG
ACGGCGCAGG CGGCGAATCT TCTGACGTAT ATCGAAACCA TTGCCGGCGA AGATATTCAA
CGCTGGGCGC TGACATGGCT GCATCCGCCG CCGGTAGCGA TCCTGTCTGT GGGAAATGGT
CTCGATATGG GATACCTCAC CGGATTTTCG CCCGCCGAGA ACGGCGTTGC CGGAGGTTTT
CGCTGGCTCG AAGGGCAGGG CATGATCGTT CTGCCGTTCG CAGAACCGCT CGACAATGAT
GCGGTCGTCA TCCTGTCGAT GACCGGCGGC GAAGCGGCTA CGACCACGCC GCTGACCGTG
CGCATCGGAA ATGGACCGGA GCAGCGCGTG GGGGTCGTGC GTGGTCAGTG GCGTCGCTAC
CACCTGCTGG CGCCGACGGG GAGCGTGAAG GAACAGCGGC TCGTGATCGC ACTGCGCGCA
CCGACCTTCG TTCCCGCGTT GCGCGACCCG GCGAGCGACG ATGCGCGCGC GCTGAGCCTG
CGCCTGGCGC GCGTACAGGT GCGGCGGTAG
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| Protein sequence | MSSTVSEARA SPLATTCALL ALLALAGVVL RLWFISVSPL DPRYSNADDG DYYRRALRFA
VTGAYVDDAW LIRPPLHVFF FALWLRLALI LGIPQQGVLF VQLAQTALAA LMPLIGYDLA
RRLFGSARAG LLFAGFLALW HPLVEQTTVL FSEHLYLFLF VLHLWLLVRY DQEGRLRDLA
LAGVALGAAA LTRSPALYAG MFVVGWLAVR ALTVAQPDMA SRWEAVKAAI APAIVVIAAC
LAIVAPWTMR NYLMYGHLIP VDTLGQINLW LDLDDVARRN EHIETLRRMP QSERHIYALE
RAREILAADP LRPFRPMWDT FRHIWKAQFI EDYFVKQSFF TRPLRETAPL GLAGDLIWLT
FTTAGLAGLA GQAREGVHFR LFFLAWIGYS LLTVLIFHVE PRYLLPLWVM IALYGAGMAT
ARWNGARATP RLALQAAIVA TFFGLLLTYR DYPAIISSGV ARERAMIAGL SAYQAHDYPA
AEQAFRAALA AQPRFVDAQV HLALALAAQQ RYDEALALIR RNSSRHAELV FGALLRDTGK
TAQAANLLTY IETIAGEDIQ RWALTWLHPP PVAILSVGNG LDMGYLTGFS PAENGVAGGF
RWLEGQGMIV LPFAEPLDND AVVILSMTGG EAATTTPLTV RIGNGPEQRV GVVRGQWRRY
HLLAPTGSVK EQRLVIALRA PTFVPALRDP ASDDARALSL RLARVQVRR
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