Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3177 |
Symbol | |
ID | 5540675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4123430 |
End bp | 4126345 |
Gene Length | 2916 bp |
Protein Length | 971 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895298 |
Product | adenylate/guanylate cyclase with GAF and PAS/PAC sensors |
Protein accession | YP_001433249 |
Protein GI | 156743120 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC TTGCACATAT CCTGGCAGTG GACGACGACG CCAGCGTGCG TCGCATGCTC CAGATTCTGC TGACGAACGC CGGGTATCGC GTTTCTGTTG CGAGTACCGG CGAAGAAGCC CTGGCGTATC TGGAACTGGT CACGCCCGAT CTGGTGCTCA TGGATGTATC ATTGCCGGGG CTGAGCGGCC AGCATGTGAT GGAGCGCGTC AAATCTGATC CAGATCGCCC CTTCATCCCT GTGATCCTGA TCACCGGTTA TGGCGACCCG GAGGCGAAAG TTGCGGCGCT CGATGCGGGC GCCGACGATT TTCTGGTGAA ACCGGTCGAT CTGACCGAAC TGCTGGCGCG GGTGCGCGCA ATGCTGCGCC TGCAACGCAG TCAGCGATCA TTGCGCGCTG AGCAGCGAAA GACGGAACTG TTGCTCCATC TGACCCGCGA ACTGGGAACG ACGCTGGATC TTGATCAGTT GTTGACCCAG TTTCTCAATC GGCTTGCCGA TGCTGTCGGC GCCGTGCGCG CCAGCATCCT GGCGCTCACC GGCGATCAGC CGCGCCTGTT CTCCAGCACG CGCAATCGGC CAACCATTCC GCTGAGCGAT ATTCTAGGGC AGGGTGTCGC CGGATGGGTG CTTCGTGAGC GGAAACCGTT GATTATTGAC GATACCCGCG ACGATCCACG ATGGATCGCG GTGAATGCCC AGCAGCGCGC GGTGCGCAGT GTTGCTGCCG TGCCGCTGGT GCGCGAGGGG CGCGTTCTGG CTGCCATTAC GCTCGTTCAC CACACGCCAG GCTATTTCAA CCACGACCAC CTGGAGTTGC TGAATGCTGT GGCAGCACAG AGCGCGATTG CACTCGAAAA TGCGGAGTTG TTCCATCTGA CGCGCATGCA GCGCGACCTG CTCGAGCGTC GCGCTGAAGA ACTGCAACGC ATCAATCAGA TCAGCCGTCA CCTGACAGAG TTAATGAGTC CTGATCAGTT GCTGCGGCTG GTGGTGCATT TGATCCACCA CACCTTTGGC TATCCGTTGG TTGCCGTTGC GTTGCACGAT GATGAGCGCC TGGCATTGGA AGCCGCTGCG GGCAGCGCAA GTATCGAACG GTTGATCGGG CAGGCGATCT CGCCCGACAC CAGCGCCGCC GGGCGGGCGA TTGCACAGAG CGAAGCGTAC TATGTCGCCG ATTTTCTTCA GACCGATTGC GCTCCATTGA CGGGAGTTGA GCGGAGCGTG CGTTCGGAAC TGGCGGTTCC GATTCAAACG GCACGCCAGG TGTTTGGCGC GCTTTCGGTC ATGGCGTATA CCCCCAATGC GTTCGGCGAT GCGGATGTTC GATTGCTGTC AACCCTGGCG AGCCAGTTGG GTATTGCGCT CGATAACGCG CGCCTGTTCA ACATGGAGCA GCGCCGCGTT CGTCAGCTCG GCACGGTGAA TAATCTGTCG CTTGCCATGA CGGCGCGTCT GGATGCAGCG GAAAATCTGA CGATTGCAGC GCGCGTGATT GCATCTATTT TTGAGGTTAC TGCCTGTGGC ATTGTGCTGA CCAACCCCAG AGTCCAGAGC ATGCGGCATA TGGTGTTTGC AACCGATGCC GCACGGGATC GTCTGCCCTG GCGCGATCTT GCTGAAACGG TCGTTCTTTC CGCGCCACAG GTTGTGAGGG CGGACGATGC GCTTCTGGCG CTATGCGCTC GCGCGCTTGT GGGCGCCGGA ATCGCAGCGC TGGCGCTGGC GCCGTTGCTG GCAAACGGTA AACAGATTGG GTTGGTGGCG CTCGATGTCA CCGGACATGA GCGACAGTTT CAGGCGACCG ATTTGACGCT GCTCGAGACG GTTGCAAGTT TGCTGGCGCA GGTGATTGAG AATGCCTGCC TGTATCGCGA GGTGGAAGAC GAACGTTCGA CACTCGGCGC TGTGTTGCGC AGCGCCGCCG ATCCGATTCT GCTGATCGAT CCGCACAATC GATTGTTGCT GGCAAATCCC GCCGCCGAGC AGCGCCTTCA CCTCGGAGAA GCGATCGGGC GGGCAATTGA CCAGGCTGTG GATCATAGCG GTCTGCTTCG TGCTCTGAGT CGCGACTCCT TGAATGGTCA GTCGATGATG GAAGTCACCC TTGCCGATGG TGCGACCTTC AACGTTAGCG TCGCTCCGGT GCGTGGCGCC AACGATGCGT TAATTGGACG GGTGGCGGTG ATGCAGGATA TTACTGCGAT CAAAGAACTC GAGCGCGCAG AGCAGGAACG CCTGCGTGCT ATGTTCCGGC GCTACGTATC GCCGCAGGTG GTCGAAGAAG TGCTGGCGGG CGGTGGTGAG TTCGGAGCGC CGCAGGAGCG CGATATTGTG GTGCTGTTTG CCGATATTCG CGGCTATACG ACGCTCGCTG AAGGTCTGGC GCCGCAAATT CTCGTGCATC AGATCCTCAA TCGCTATTTC ACCGCTATGA CCGAGGCGCT CTACCGACAT GGCGGGACGG TCGATAAGTT TCTGGGAGAT GGGTTGATCG GTGTGTTTGG CGTGCCGATT GCGCGGGATG ACGATATTCC CCGGTCGTTA CGCGCAGCAG TCGATCTCCA GCTGGCGTTC GCCGATCTTC GGAATGTCTG GCGCCGCGAT CTCGGTCTCG ACCTTGGCAT GGGGGTGGGG ATTGCGTATG GACCGGCGCT CGTCGGCAAT ATTGGGTCGC CGCAGCGCCT CGATTACACG GTAATTGGGG ATGTCGTCAA TACTGCTAAC CGCTTGAGCG GTCTGGCGCG CGCCGATCAG ATCATTGTTT CGCATCGCCT GATCGATGCG CTGCCGCTGG GAGATGATCT GCCCTGGTTG TTGCGTCCGA TTGGTCCGGT GATGCTCAAG GGGAAGCACG AGCCGCATAT GGTGTATGAG ATTGTGTATC AGATCGCGGT GTCGGACGAT GGATGA
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Protein sequence | MTELAHILAV DDDASVRRML QILLTNAGYR VSVASTGEEA LAYLELVTPD LVLMDVSLPG LSGQHVMERV KSDPDRPFIP VILITGYGDP EAKVAALDAG ADDFLVKPVD LTELLARVRA MLRLQRSQRS LRAEQRKTEL LLHLTRELGT TLDLDQLLTQ FLNRLADAVG AVRASILALT GDQPRLFSST RNRPTIPLSD ILGQGVAGWV LRERKPLIID DTRDDPRWIA VNAQQRAVRS VAAVPLVREG RVLAAITLVH HTPGYFNHDH LELLNAVAAQ SAIALENAEL FHLTRMQRDL LERRAEELQR INQISRHLTE LMSPDQLLRL VVHLIHHTFG YPLVAVALHD DERLALEAAA GSASIERLIG QAISPDTSAA GRAIAQSEAY YVADFLQTDC APLTGVERSV RSELAVPIQT ARQVFGALSV MAYTPNAFGD ADVRLLSTLA SQLGIALDNA RLFNMEQRRV RQLGTVNNLS LAMTARLDAA ENLTIAARVI ASIFEVTACG IVLTNPRVQS MRHMVFATDA ARDRLPWRDL AETVVLSAPQ VVRADDALLA LCARALVGAG IAALALAPLL ANGKQIGLVA LDVTGHERQF QATDLTLLET VASLLAQVIE NACLYREVED ERSTLGAVLR SAADPILLID PHNRLLLANP AAEQRLHLGE AIGRAIDQAV DHSGLLRALS RDSLNGQSMM EVTLADGATF NVSVAPVRGA NDALIGRVAV MQDITAIKEL ERAEQERLRA MFRRYVSPQV VEEVLAGGGE FGAPQERDIV VLFADIRGYT TLAEGLAPQI LVHQILNRYF TAMTEALYRH GGTVDKFLGD GLIGVFGVPI ARDDDIPRSL RAAVDLQLAF ADLRNVWRRD LGLDLGMGVG IAYGPALVGN IGSPQRLDYT VIGDVVNTAN RLSGLARADQ IIVSHRLIDA LPLGDDLPWL LRPIGPVMLK GKHEPHMVYE IVYQIAVSDD G
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