Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3138 |
Symbol | |
ID | 5540636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4069069 |
End bp | 4069779 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640895259 |
Product | glycosyl transferase family protein |
Protein accession | YP_001433210 |
Protein GI | 156743081 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTCGACA CCCTGAGCGT CATAATCCCG ACGCGCAACG AAGCGCCATT GATCGGAAGA TTTCTCGCCG CCCTTCCCGC ATCAATGGAA CTGATTGTCG TCGATGCCAG CAACGATGAG ACCCCTGCAA TCATCGAGCG CGCACGACCG CACAACACCC GGGTTATTCG CTCCCCCGCC GGGGTTGCAG AAGCGCGCGC GATCGGCGCG GCAGCGGCAA GCGGCGACTG GTTGATCTTC AGCGACGCTG ATGTGCATTT TGCACCCGGC TATTTCGATC GTTTTGCGCG CTATACGGAC TCAGACGCGG TGTACGGTCC CAAATTTGCA ACCGCAGCAT ACCGATGGTA CAGCGCGATC TTTACCGGCG GGCAGCGAAT GGCGCATGCG CTCGGCTTTC CGGCGGCATC CGGCTCGAAT ATGGCCGTCA GGCGTGACGT CCTGAAGGCG ATTGGCGGTT TCCGTTGCGA CCTGCCGGTC AATGAAGACA GCGAACTCTT CCTTCGTCTT GCCTATCGCG GCTATCGCAT CCGGTTCGCT GCCGATCTGG CGGTCTATTC ACTCGACGAT CGCCGGCTGC GGCGCGGTGC GGTGCGCAAA TTGTTCCACA GCACCGCACG ATGTGCGTTG ATTGCACTGG GGCTGCGCGT GCCACTTCCG CAACGCCTCC TGCGCCACGA TTGGGGATAC TGGAGCACCA CGCGGCGATG A
|
Protein sequence | MLDTLSVIIP TRNEAPLIGR FLAALPASME LIVVDASNDE TPAIIERARP HNTRVIRSPA GVAEARAIGA AAASGDWLIF SDADVHFAPG YFDRFARYTD SDAVYGPKFA TAAYRWYSAI FTGGQRMAHA LGFPAASGSN MAVRRDVLKA IGGFRCDLPV NEDSELFLRL AYRGYRIRFA ADLAVYSLDD RRLRRGAVRK LFHSTARCAL IALGLRVPLP QRLLRHDWGY WSTTRR
|
| |