Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2955 |
Symbol | |
ID | 5540445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3833357 |
End bp | 3834811 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895074 |
Product | carbamoyl-phosphate synthase L chain ATP-binding |
Protein accession | YP_001433033 |
Protein GI | 156742904 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000261776 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGCGCA CCATCCACAA AGTCCTTGTA GCGAACCGTG GCGTTCCGGC AGTGAGGATT ATGCACACCT GCCGTGACCG GAAGATCCCC ACGACTGCGG TATACAGCAC GCCTGATCGC CTCGCGTACC ACGTCTTTAT GGCGGATACC GCCATTCATA TTGGCGATGC GCCACCGATT AACTCATACC TGAACGGAGA TCGGATCATC GAGGCCGCGC TGGCCAGCGG ATCGAACGCT ATCCATCCCG GTTGGGGGTT TCTGGCGGAG AATGCCGACT TTGCCCAAAA GGTCATCGAT GCTGGACTGA TCTGGATCGG ACCCCAACCG GACGTTATTC GGATGATGGG CGATAAGATT CAGGCAAAGG AGATTGCCAG GCGCTCGAAT GTGCCGACTA TCCCCGGAAT AGAGAATGTC ACCAGCGCCG GGCAGATAAC TGACTGGATG CGCGACCAGG ATATCGCCTT TCCGATTATG ATCAAGGCGG CTTCGGGTGG AGGCGGCAAG GGAATGGTCA GAGTCGACAC GCCCGATCAA ATCCCCGTCG CGCTCGCCCA GGCCCGTTCA GAAGCGAAGA AAGCCTTCGG CGACGATACG GTCCTCGTTG AGAAGTATAT TGAGCATGGT CGGCATATTG AGGTGCAGGT GGTGGCTGAT GAACACCGTC ACGTCGTTCA CCTGTTCGAG CGCGAATGCA CGCTCCAACG GCGCAACCAG AAGATTATCG AGGAAGCGCC CTCGACCCTC GAAAATGACC TGCGCCAGGA AATCTGCGTT ACTGCGGCGC GCCTGATGCG CCGAATAGGC TACACCTCGG CTGGCACCGT GGAGTTCCTC TTCGACCCCG CAACCCAGAG TTTCTACTTC CTCGAGGTCA ATACGCGACT CCAGGTCGAG CATGGCATCA CCGAACTCAT CACCGGTCTC GATATCGTCA GCATTATGCT GGACGTTGCC GAGGGCAAGC CCTTGCCGAT CAAGCAACTC GATGTCGTCC CCAACCGCTG CGCTCTTGAG GTGCGCCTGA ACGCCGAGGA TCCCAAGACC TTCGCTCCCT CGTTCGGCAA AATTACCCGT CTGCGCACCC CATTGGGACC CAACGTGCGC GTCCTGCTCG GCGCCGCCGA AGGGGAGGAC ATCCCGCCCT ATTACGACTC GCTCTTCATG CTGCTGATGA CGTCGGGCGC CGACCGGGCT GATGCGCTGC GGGTGATGGA TCGGGCGCTC ACCGGCGACC TGCGGATCGA GGGGATCAAG ACCCTCGCGC CCTTGCTGCT GAGTATCATC AGACACCCCA AGTTCATCGC CGGCGACTTT TCGACCAAGT TCATCGAGCA ACACCTGCCG GAGCTTGTCT CCGGCTTCCG TGAGCGTACC GGCGAGGACG AGATGCTCCG GGTCGCCCAG TATGTGGCTG AGATCTCCGC TCTGGGTCCG CAGAGTTGGA TGTGA
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Protein sequence | MQRTIHKVLV ANRGVPAVRI MHTCRDRKIP TTAVYSTPDR LAYHVFMADT AIHIGDAPPI NSYLNGDRII EAALASGSNA IHPGWGFLAE NADFAQKVID AGLIWIGPQP DVIRMMGDKI QAKEIARRSN VPTIPGIENV TSAGQITDWM RDQDIAFPIM IKAASGGGGK GMVRVDTPDQ IPVALAQARS EAKKAFGDDT VLVEKYIEHG RHIEVQVVAD EHRHVVHLFE RECTLQRRNQ KIIEEAPSTL ENDLRQEICV TAARLMRRIG YTSAGTVEFL FDPATQSFYF LEVNTRLQVE HGITELITGL DIVSIMLDVA EGKPLPIKQL DVVPNRCALE VRLNAEDPKT FAPSFGKITR LRTPLGPNVR VLLGAAEGED IPPYYDSLFM LLMTSGADRA DALRVMDRAL TGDLRIEGIK TLAPLLLSII RHPKFIAGDF STKFIEQHLP ELVSGFRERT GEDEMLRVAQ YVAEISALGP QSWM
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