More than 300 homologs were found in PanDaTox collection
for query gene Rcas_2955 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_2955  carbamoyl-phosphate synthase L chain ATP-binding  100 
 
 
484 aa  994    Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.000261776 
 
 
-
 
NC_010803  Clim_1375  Carbamoyl-phosphate synthase L chain ATP-binding  65.77 
 
 
485 aa  665    Chlorobium limicola DSM 245  Bacteria  normal  0.0154864  n/a   
 
 
-
 
NC_008639  Cpha266_1064  carbamoyl-phosphate synthase L chain, ATP-binding  67.22 
 
 
485 aa  667    Chlorobium phaeobacteroides DSM 266  Bacteria  unclonable  0.000000351305  n/a   
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  48.16 
 
 
498 aa  410  1e-113  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009511  Swit_4698  acetyl-CoA carboxylase, biotin carboxylase  48.46 
 
 
450 aa  396  1e-109  Sphingomonas wittichii RW1  Bacteria  normal  0.641481  normal 
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  45.98 
 
 
450 aa  392  1e-108  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_0421  acetyl-CoA carboxylase biotin carboxylase subunit  46.31 
 
 
448 aa  390  1e-107  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_3190  pyruvate carboxylase subunit A  43.66 
 
 
492 aa  390  1e-107  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007335  PMN2A_1423  acetyl-CoA carboxylase biotin carboxylase subunit  46.43 
 
 
447 aa  388  1e-106  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_03221  acetyl-CoA carboxylase biotin carboxylase subunit  45.98 
 
 
448 aa  388  1e-106  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_008942  Mlab_0138  pyruvate carboxylase subunit A  45.48 
 
 
500 aa  383  1e-105  Methanocorpusculum labreanum Z  Archaea  normal  0.732252  normal 
 
 
-
 
NC_004310  BR0906  acetyl-CoA carboxylase biotin carboxylase subunit  45.33 
 
 
452 aa  382  1e-105  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0902  acetyl-CoA carboxylase biotin carboxylase subunit  45.33 
 
 
452 aa  382  1e-105  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_00711  acetyl-CoA carboxylase biotin carboxylase subunit  45.01 
 
 
449 aa  382  1e-105  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_2259  acetyl-CoA carboxylase biotin carboxylase subunit  45.64 
 
 
448 aa  382  1e-105  Synechococcus sp. CC9605  Bacteria  normal  0.571536  normal  0.652272 
 
 
-
 
NC_007577  PMT9312_0062  acetyl-CoA carboxylase biotin carboxylase subunit  45.01 
 
 
448 aa  383  1e-105  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1379  acetyl-CoA carboxylase biotin carboxylase subunit  46.99 
 
 
453 aa  384  1e-105  Synechococcus elongatus PCC 7942  Bacteria  normal  0.34087  normal 
 
 
-
 
NC_009831  Ssed_4090  acetyl CoA carboxylase, biotin carboxylase subunit  44.79 
 
 
456 aa  382  1e-105  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1826  acetyl-CoA carboxylase, biotin carboxylase  45.23 
 
 
446 aa  384  1e-105  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000136846  n/a   
 
 
-
 
NC_008819  NATL1_01241  acetyl-CoA carboxylase biotin carboxylase subunit  45.9 
 
 
447 aa  384  1e-105  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.114391  normal 
 
 
-
 
NC_010730  SYO3AOP1_1043  Carbamoyl-phosphate synthase L chain ATP-binding  44.26 
 
 
476 aa  382  1e-105  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1783  pyruvate carboxylase subunit A  43.24 
 
 
493 aa  382  1e-105  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.304639  normal 
 
 
-
 
NC_008609  Ppro_2022  acetyl-CoA carboxylase, biotin carboxylase  45.95 
 
 
446 aa  382  1e-105  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0711095  n/a   
 
 
-
 
NC_008698  Tpen_0119  carbamoyl-phosphate synthase L chain, ATP-binding  45.64 
 
 
492 aa  382  1e-105  Thermofilum pendens Hrk 5  Archaea  normal  0.334605  n/a   
 
 
-
 
NC_002939  GSU2019  acetyl-CoA carboxylase, biotin carboxylase  45.64 
 
 
446 aa  379  1e-104  Geobacter sulfurreducens PCA  Bacteria  normal  0.274625  n/a   
 
 
-
 
NC_008816  A9601_00721  acetyl-CoA carboxylase biotin carboxylase subunit  45.01 
 
 
449 aa  379  1e-104  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.249054  n/a   
 
 
-
 
NC_007355  Mbar_A1587  pyruvate carboxylase subunit A  45.76 
 
 
493 aa  380  1e-104  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.482835  normal 
 
 
-
 
NC_007517  Gmet_0984  biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha  45.64 
 
 
446 aa  379  1e-104  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000016105  normal  0.0128167 
 
 
-
 
NC_011832  Mpal_1009  pyruvate carboxylase subunit A  45.15 
 
 
491 aa  381  1e-104  Methanosphaerula palustris E1-9c  Archaea  normal  0.716898  normal  0.701682 
 
 
-
 
NC_013037  Dfer_3259  Carbamoyl-phosphate synthase L chain ATP- binding  45.73 
 
 
501 aa  379  1e-104  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.0256085 
 
 
-
 
NC_009667  Oant_2274  acetyl-CoA carboxylase biotin carboxylase subunit  45.35 
 
 
459 aa  381  1e-104  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.41756  n/a   
 
 
-
 
NC_010001  Cphy_0521  acetyl-CoA carboxylase, biotin carboxylase  46.07 
 
 
448 aa  379  1e-104  Clostridium phytofermentans ISDg  Bacteria  normal  0.0922671  n/a   
 
 
-
 
NC_008817  P9515_00691  acetyl-CoA carboxylase biotin carboxylase subunit  44.52 
 
 
449 aa  377  1e-103  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.36167  n/a   
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  46.3 
 
 
696 aa  377  1e-103  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3445  acetyl-CoA carboxylase, biotin carboxylase  45.66 
 
 
448 aa  376  1e-103  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0516  acetyl-CoA carboxylase biotin carboxylase subunit  45.6 
 
 
447 aa  377  1e-103  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0701369  normal 
 
 
-
 
NC_014248  Aazo_0051  acetyl-CoA carboxylase biotin carboxylase  45.15 
 
 
448 aa  377  1e-103  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2869  acetyl-CoA carboxylase biotin carboxylase subunit  44.72 
 
 
451 aa  375  1e-103  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.22869 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  45.81 
 
 
682 aa  376  1e-103  Polaromonas sp. JS666  Bacteria  normal  normal  0.283926 
 
 
-
 
NC_009976  P9211_00681  acetyl-CoA carboxylase biotin carboxylase subunit  44.52 
 
 
448 aa  375  1e-103  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_008553  Mthe_0794  pyruvate carboxylase subunit A  46.21 
 
 
499 aa  377  1e-103  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_008554  Sfum_0676  carbamoyl-phosphate synthase L chain, ATP-binding  43.48 
 
 
477 aa  376  1e-103  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.068223 
 
 
-
 
NC_014230  CA2559_11348  biotin carboxylase (accC)  45.23 
 
 
480 aa  376  1e-103  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0917166  n/a   
 
 
-
 
NC_002977  MCA1046  acetyl-CoA carboxylase, biotin carboxylase  46.62 
 
 
448 aa  373  1e-102  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  46.15 
 
 
682 aa  374  1e-102  Acidovorax sp. JS42  Bacteria  normal  0.114869  normal 
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  45.56 
 
 
665 aa  375  1e-102  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_010578  Bind_3891  acetyl-CoA carboxylase, biotin carboxylase  45.09 
 
 
525 aa  373  1e-102  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5425  acetyl-CoA carboxylase, biotin carboxylase  45.74 
 
 
451 aa  374  1e-102  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.943443 
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  45.63 
 
 
675 aa  373  1e-102  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.848501 
 
 
-
 
NC_009767  Rcas_0979  carbamoyl-phosphate synthase L chain ATP-binding  48.22 
 
 
659 aa  373  1e-102  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.513441  normal 
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  46.27 
 
 
682 aa  375  1e-102  Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_013411  GYMC61_2441  acetyl-CoA carboxylase biotin carboxylase subunit  44.47 
 
 
450 aa  372  1e-102  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  46.41 
 
 
682 aa  375  1e-102  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2435  acetyl-CoA carboxylase biotin carboxylase subunit  45.07 
 
 
445 aa  374  1e-102  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.259885  n/a   
 
 
-
 
NC_007794  Saro_2079  biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha  45.09 
 
 
448 aa  372  1e-102  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.252313  n/a   
 
 
-
 
NC_007802  Jann_2715  acetyl-CoA carboxylase biotin carboxylase subunit  44.81 
 
 
448 aa  373  1e-102  Jannaschia sp. CCS1  Bacteria  normal  0.0856039  normal 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  45.09 
 
 
684 aa  372  1e-102  Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  45.93 
 
 
682 aa  373  1e-102  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1702  3-methylcrotonoyl-CoA carboxylase, alpha subunit  47.76 
 
 
652 aa  374  1e-102  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  44.18 
 
 
682 aa  372  1e-102  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal 
 
 
-
 
NC_011894  Mnod_6042  acetyl-CoA carboxylase, biotin carboxylase  45.54 
 
 
451 aa  372  1e-102  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.650251  n/a   
 
 
-
 
NC_009051  Memar_1642  pyruvate carboxylase subunit A  43.36 
 
 
491 aa  371  1e-101  Methanoculleus marisnigri JR1  Archaea  normal  0.892085  n/a   
 
 
-
 
NC_002976  SERP0704  pyruvate carboxylase  43.87 
 
 
1147 aa  369  1e-101  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2602  acetyl-CoA carboxylase, biotin carboxylase  43.68 
 
 
447 aa  370  1e-101  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.000536628  normal 
 
 
-
 
NC_006368  lpp2718  pyruvate carboxylase subunit A  45.25 
 
 
471 aa  370  1e-101  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2591  pyruvate carboxylase subunit A  45.33 
 
 
471 aa  369  1e-101  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007509  Bcep18194_C7328  pyruvate carboxylase  41.97 
 
 
1172 aa  370  1e-101  Burkholderia sp. 383  Bacteria  normal  normal  0.402433 
 
 
-
 
NC_008783  BARBAKC583_0761  acetyl-CoA carboxylase biotin carboxylase subunit  44.1 
 
 
446 aa  371  1e-101  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  46.37 
 
 
682 aa  369  1e-101  Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_009523  RoseRS_0434  carbamoyl-phosphate synthase L chain, ATP-binding  47.63 
 
 
659 aa  370  1e-101  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.321717 
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  45.33 
 
 
655 aa  369  1e-101  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2205  carbamoyl-phosphate synthase L chain, ATP-binding  45.83 
 
 
658 aa  372  1e-101  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0738027  normal  0.716563 
 
 
-
 
NC_011989  Avi_1787  acetyl-CoA carboxylase biotin carboxylase subunit  44.54 
 
 
450 aa  371  1e-101  Agrobacterium vitis S4  Bacteria  normal  0.0397228  n/a   
 
 
-
 
NC_008254  Meso_1716  acetyl-CoA carboxylase biotin carboxylase subunit  44.87 
 
 
447 aa  371  1e-101  Chelativorans sp. BNC1  Bacteria  normal  0.305928  n/a   
 
 
-
 
NC_011004  Rpal_2436  Carbamoyl-phosphate synthase L chain ATP-binding  47.01 
 
 
655 aa  370  1e-101  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_008347  Mmar10_1265  acetyl-CoA carboxylase biotin carboxylase subunit  45.5 
 
 
448 aa  371  1e-101  Maricaulis maris MCS10  Bacteria  normal  0.0289407  hitchhiker  0.00381456 
 
 
-
 
NC_008392  Bamb_5754  pyruvate carboxylase  41.43 
 
 
1169 aa  370  1e-101  Burkholderia ambifaria AMMD  Bacteria  normal  0.345143  normal 
 
 
-
 
NC_011729  PCC7424_3033  acetyl-CoA carboxylase biotin carboxylase subunit  46.33 
 
 
448 aa  370  1e-101  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010557  BamMC406_5521  pyruvate carboxylase  41.04 
 
 
1173 aa  367  1e-100  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  44.42 
 
 
667 aa  367  1e-100  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4207  acetyl-CoA carboxylase, biotin carboxylase  44.04 
 
 
588 aa  368  1e-100  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2028  acetyl-CoA carboxylase, biotin carboxylase  44.79 
 
 
446 aa  367  1e-100  Meiothermus silvanus DSM 9946  Bacteria  normal  0.256761  normal 
 
 
-
 
NC_010338  Caul_2564  acetyl-CoA carboxylase biotin carboxylase subunit  44.8 
 
 
447 aa  366  1e-100  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1480  acetyl-CoA carboxylase biotin carboxylase subunit  44.92 
 
 
448 aa  368  1e-100  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.841777 
 
 
-
 
NC_007492  Pfl01_3950  carbamoyl-phosphate synthase L chain, ATP-binding  44.99 
 
 
653 aa  367  1e-100  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.13606  normal 
 
 
-
 
NC_011899  Hore_06260  acetyl-CoA carboxylase, biotin carboxylase  45.23 
 
 
451 aa  365  1e-100  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000000113336  n/a   
 
 
-
 
NC_013411  GYMC61_1852  pyruvate carboxylase  43.44 
 
 
1147 aa  367  1e-100  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_1544  acetyl-CoA carboxylase biotin carboxylase  43.05 
 
 
447 aa  366  1e-100  Meiothermus ruber DSM 1279  Bacteria  normal  0.111795  hitchhiker  0.00898283 
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  45.36 
 
 
666 aa  368  1e-100  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3259  carbamoyl-phosphate synthase L chain, ATP-binding  45.96 
 
 
659 aa  366  1e-100  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1521  acetyl-CoA carboxylase, biotin carboxylase  47.23 
 
 
494 aa  368  1e-100  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009440  Msed_0147  carbamoyl-phosphate synthase L chain, ATP-binding  43.59 
 
 
510 aa  367  1e-100  Metallosphaera sedula DSM 5348  Archaea  normal  normal  0.012 
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  44.21 
 
 
667 aa  366  1e-100  Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_008025  Dgeo_0466  acetyl-CoA carboxylase, biotin carboxylase  43.18 
 
 
445 aa  365  1e-100  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0174688  normal 
 
 
-
 
NC_008346  Swol_0559  biotin carboxylase  45.01 
 
 
449 aa  367  1e-100  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.000152062  n/a   
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  44.63 
 
 
667 aa  365  1e-100  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  45 
 
 
675 aa  366  1e-100  Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_012793  GWCH70_0980  pyruvate carboxylase  43.03 
 
 
1147 aa  367  1e-100  Geobacillus sp. WCH70  Bacteria  normal  0.125957  n/a   
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  45.43 
 
 
666 aa  365  1e-100  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal 
 
 
-
 
NC_005945  BAS3859  pyruvate carboxylase  42.24 
 
 
1148 aa  365  1e-99  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
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