Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2940 |
Symbol | |
ID | 5540430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3815256 |
End bp | 3816203 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640895060 |
Product | chaperone DnaJ domain-containing protein |
Protein accession | YP_001433019 |
Protein GI | 156742890 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.383113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00256478 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTATGG AGTTCAAAGA CTACTATGCC GTCCTTGGCG TCCCGCCCGA CGCCGACGAG CAAACGATCA AGAAAGCGTA CCGCAAACTG GCGCGGCAGT ACCATCCCGA CGTCAACCCT GGTGACAAAA AGGCTGAAGA GCGCTTCAAA GAGATCAATG AAGCCTACGA GGCGCTGAGC GACCCGGAAC GCCGCCACAA GTACGATCAG TTGCGCGAAC AGTATCAGCG CTGGCAGCAG CGCGGCGGCA GCGGCGAGTT CGACTGGGGT CCCTGGCAAA CGGCGCCGGG GCAGACAGTC TACACCTATA CAACGGTCTC ACCGGAGGAC CTGGAAGACC TCTTCGGAGG TGAAAGTCCC TTTTCGGACT TCTTCGGGAC GATCTTCGGT CAGCCACATG GCGCCACCCC CCGTGGACCG CAGCGCGGGC GCGATCTTGA ACTGCCGGTT GAGATTTCGC TCGAAGAGGC GTTTTACGGC ACGACACGCT CGCTTCAGGT AGGCACGCGG CGCATCGAGG CGAAGATTCC GGTCGGCGCG CGCACCGGAA CCCGTGTGCG TCTTGCCGGG CAGGGGCGCC CCGGCATTGC CGGAGGTCCG CCGGGCGATC TCTACCTGCT GATCACCGTC CTGCCGCATC CACAGTTCGA GCGCGACGGC GATGATCTGA CCACGACCGT TTCGGTTGAT TGTTTTACCG CAATTGCCGG CGGCGAGGCG CGCGTTCCGA CATTGGACGG TTCGGTGCTG CTCAAGATTC CGCCGCGCAC GCAGGCAGAT CAGGTCTTCC GACTGCGGGG CAAAGGCATG CCACGCCTCG AACGCCCGAC CGAACGCGGC GATCTCTTTG CCCGGGTGAA ACTGGTGTTG CCCGAAACGT TGAGTGATGC TGACGTCGAA ACGATTCGCA CACTGGCGCG CGAGCGGAGC GCCCGAAAAA AAGGGTGA
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Protein sequence | MPMEFKDYYA VLGVPPDADE QTIKKAYRKL ARQYHPDVNP GDKKAEERFK EINEAYEALS DPERRHKYDQ LREQYQRWQQ RGGSGEFDWG PWQTAPGQTV YTYTTVSPED LEDLFGGESP FSDFFGTIFG QPHGATPRGP QRGRDLELPV EISLEEAFYG TTRSLQVGTR RIEAKIPVGA RTGTRVRLAG QGRPGIAGGP PGDLYLLITV LPHPQFERDG DDLTTTVSVD CFTAIAGGEA RVPTLDGSVL LKIPPRTQAD QVFRLRGKGM PRLERPTERG DLFARVKLVL PETLSDADVE TIRTLARERS ARKKG
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