Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2915 |
Symbol | |
ID | 5540405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3776894 |
End bp | 3778348 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640895036 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_001432995 |
Protein GI | 156742866 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGATCGA ATATCGATAC TGTGCGCGGC ATGCGCGACG TACTGCCGTC CGAGGCGGCG GCGCAGACGG CGGCGGCGGC GGCAATCGAA CGTGTGCTGG CTGCCTGGGG GTACGAACCC GTCGATCTGC CAATTATCGA GTATCGTGAT CTCTATCTGC GCAAACTTGG CGAAGAACTG GTCGGGAAAG TCTACGAGTT CAATTTCAAC GGGCGCGATC TGGCGCTGCG CCCGGAATGG ACGGCGTCGG TGCTGCGCGC CTATGTGGGG CGCATGCAGG ACCAACCGCT GCCGCTGCGC CTGCGCTATG CCGGTCCGGT CTTTCGCAAC GAACGACCCC AACGCGCTAC CTATCGGCAG TTCACCCAGG TCGGCGTCGA ATTGATCGGC GGCGCGGCGC CACGCGCCGA TGCCGAATGC CTGGCGCTGG CGTGCGAAGG TCTGGCTGCT GCTGGTGTGA CGCATTTCAC GGTGCGGATC GGTCATATCG GACTTATTCG CTCGCTGCTT GCCGCTCTTG GATTGAGTGA ACGCGCGCAG GGCCGGCTGG CGTGGCGGCT CGAACGGTTG CGTGAGCATG GAGCGGCAGC AGTGCGCGCA GAGTTCGATG CGCCTGCTAC GGCACTGCCG CTCGATCCGG CGCTGCTGGA CGGGATCGAC GATCAGCGCG CCGAAGCCCT GCTCTTGCAC GCGCTGCGTG AGATCGGGGT CAATCTCCGT TTCGGAACCC GCCCTCCGGA GGCGATTGTT GGCCGCCTGG TGCGGAAGTT GCGCCGGAGT GAGTCCCGCG ATCAGATCGA TCGGGCGTTA CAGATGCTTG AGCGTCTGTG TCGGGTCGAA GGCGACCCGA ACGAAGCGTT TGGCGCGGCA GAGGAGATGC TGCGTGATTA TGCGGTGACC GGTCTCGACG AATTGCGCGC GATCCTGCGC CTGGCAGCGG CGCATGGCGT GGCGCTGGAT CGGGTGCGGC TCGATTTTGG CCTGGGCCGT GGGTTACACT ATTACACCGG TATGATCTTT GAAATCTATG CTGGCGATGG TTTGCAGTTG TGTGGCGGCG GACGGTACGA CGATCTGGTG AGCGCACTGG GCGGACGCCA ACCAACCCCT GCCGTCGGTT TTGCCTATGG TCTGGAACGA GTGGTGGCGG TTGCATCACC GGTCGCTGCA CCGTCCCGCC CGCCGGTTGC GCTGGTGGTC GCAACGGACG ATGATGTCTA CCCCTACGCG CTGGAAGTGG CGCGGCTGTT GCGGTTGCGT GGGCACACAG CGATGACCGA CGTGCGGATG CGCGGTATCA GCGGCAATCT GCGCGATGCC GCGCGTCGCG GGGTGCGGTT TGTCGTCGTG GTTGGCGCGG ACGAATGCGC GCAACGCTGC GTCGTCTGGC GTGATCTGGA GCGCCACGAG GAGTATCGCA TCGCATTGGG CGATATTCCG CAGGCGAAGG AGTAG
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Protein sequence | MGSNIDTVRG MRDVLPSEAA AQTAAAAAIE RVLAAWGYEP VDLPIIEYRD LYLRKLGEEL VGKVYEFNFN GRDLALRPEW TASVLRAYVG RMQDQPLPLR LRYAGPVFRN ERPQRATYRQ FTQVGVELIG GAAPRADAEC LALACEGLAA AGVTHFTVRI GHIGLIRSLL AALGLSERAQ GRLAWRLERL REHGAAAVRA EFDAPATALP LDPALLDGID DQRAEALLLH ALREIGVNLR FGTRPPEAIV GRLVRKLRRS ESRDQIDRAL QMLERLCRVE GDPNEAFGAA EEMLRDYAVT GLDELRAILR LAAAHGVALD RVRLDFGLGR GLHYYTGMIF EIYAGDGLQL CGGGRYDDLV SALGGRQPTP AVGFAYGLER VVAVASPVAA PSRPPVALVV ATDDDVYPYA LEVARLLRLR GHTAMTDVRM RGISGNLRDA ARRGVRFVVV VGADECAQRC VVWRDLERHE EYRIALGDIP QAKE
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