| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2888 |
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| Symbol | |
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| ID | 5540377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3745802 |
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| End bp | 3747082 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895008 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432968 |
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| Protein GI | 156742839 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCTC TGCGTCCTAT CGCGCTGGTT GCGCTTGCAC TGCTGCTCTT CGTGGCGGCG
CACGGCACGG GGATCGATCT GTTTTTCCAA CTGAGCTACC TGTTAGTTGG CATTGTGATT
GTAGCGTACC TGTGGGCATG GCTCAATCTG CGTGGTTTGA GCGTGCGGCG CGAGGTTTTC
ACCCATCGCG CACAGGTCGG AGATGTGGTG CGCGAGCGGA TGACGCTGGT CAACCACTGG
TTCCTGCCCA AACTCTGGAT CGAGGTGATC GACCGTTCAA ACCTGCCCGA CCACAGTGCC
GGTTTCGTCG CGTATCTACC AGGATACGAT CAGCGGCGCC AGGTTATTCG CACCACCTGC
ACCATGCGCG GGAAGTTCCG GTTGGGTCCG GTGACGCTGG TAAGTAGTGA CCTGCTGGGT
CTGTTTCGTT TCCAGCGCGA TATTCCAGGC GATAACGAGA TTCTGGTCTA CCCGCGCACC
GTTCCGCTGC CAGGTTTCGT GCTGCCCGGC GCAGAATTGC CGGGTGGCCA GGACCTCCGG
CGACGCACGT ACCACGTAAC ACCAAATGTC GCCGCCATTC GCGACTATCA ACCCGGCGAC
GGTTTCAACC GCATTCACTG GCGGAGCACA GCGCGCCTGG GCAGGTTGAT GGTGAAGGAG
TTTGAACTCG ATCCGACTGC CGAGGTTTAT GTGGCGCTCG ATATGCATGA ATATGTGCAG
CAGGCATGGC GGCCCGTAGA AAGAACTTCG GGCAGGCAGT TCCGGCGAAC CACCGAGTCG
ACCGAGGAAT ATGCGGTGCA TGCCGCAGCA TCGATTGCGC GTCATGTGCT CGAGCAGAAT
CGTGCCGTGG GGTTGATCGC CTGGGGACAG CGCCGCGAAG TCATTCCGCC TGAGCGCGAG
GCGCGGCAGT TGTACAAAAT CCTGGAGGCG CTGGCGGAAC TGCGCGCCTA TGGGTCTGCG
TCGCTGGCGG AAGTGTTGAG CGCCGAAAAC GCACGCTTCG GGCGCAACTG CACGCTGGTG
GTGATTACTC CGTCGCTGGA TGAGCGGTGG GTTACAGGAG TCCAGCACTT GCGGTATCGA
GGGGTGCGTA TCGTTGCGAT TCTGATCGAT GCGGAGTCGT TCGGCGGTGG GCGCAGCAAC
GAGTCGATCC GTGGACGCCT GGCAGAACTG CGCGTGCCAA CCTGTGTCTG GCAACGCGGA
CAACCGCTGA CGACGGCGCT TGCTCAGACC GCCGCAATGG GTCTTCACCA TGCGGGAGCG
CCGCACGCTC GCCCATCGTG A
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| Protein sequence | MHALRPIALV ALALLLFVAA HGTGIDLFFQ LSYLLVGIVI VAYLWAWLNL RGLSVRREVF
THRAQVGDVV RERMTLVNHW FLPKLWIEVI DRSNLPDHSA GFVAYLPGYD QRRQVIRTTC
TMRGKFRLGP VTLVSSDLLG LFRFQRDIPG DNEILVYPRT VPLPGFVLPG AELPGGQDLR
RRTYHVTPNV AAIRDYQPGD GFNRIHWRST ARLGRLMVKE FELDPTAEVY VALDMHEYVQ
QAWRPVERTS GRQFRRTTES TEEYAVHAAA SIARHVLEQN RAVGLIAWGQ RREVIPPERE
ARQLYKILEA LAELRAYGSA SLAEVLSAEN ARFGRNCTLV VITPSLDERW VTGVQHLRYR
GVRIVAILID AESFGGGRSN ESIRGRLAEL RVPTCVWQRG QPLTTALAQT AAMGLHHAGA
PHARPS
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