Gene Rcas_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2798 
Symbol 
ID5540285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3615740 
End bp3616558 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content61% 
IMG OID640894925 
Productmethyltransferase type 11 
Protein accessionYP_001432887 
Protein GI156742758 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGGCA TTTCATTCGA CCGTGCTGTC GATTACTACG ACGCAACCCG CGGCTATCCG 
CCGGGGGTTG CCGAACAGTT GCGCGATGCG CTGGTTGCAA CGCTTCAGTT GAGCCAGCAC
GCGCGGTTAC TCGAAGCGGG CATCGGAACA GGGCGTATCG CGCTTCCCTT TATTGAGAAG
GGATACTTCT ACGTCGGCGT TGATCTCGCG CGGCGTATGA TGGGGCAACT GTGCCAGAAA
CTCGATGGGC GCGTCCATCA GGCGTACCTG GTGTGCGGCG ATGTGATGCA TATGCCGGCG
GCAAATGCGG CATTCGATGC TGTGATCATG GCGCACGTGC TCCATCTGGT GGCAGATTGG
CGATGGACGC TGAACGAAGT ACGCCGCGTT CTGCACCCAG GGGGCGCTAT TGTGCTGCTC
AGTGATGAAC GCAACGAACA GGACGGCGAT CCTCCTGCGC CACGCATGCA GGTGCAGCAG
GCATGGTCAG CCATCCTGGA TGAACTGAAC GTTCCGCCGG ACCAGCGACG CGAGAGCGCT
CCGCATGGTC TGGATGAGCG GTTTCAGTCG CATCTCGAAG CGTCTGGCGC AACCGTAGAG
CGCGCGACGC TGCTCACCTA CCGTCAGTCG CCGCAGAGTG TGCGGTCCGT GGCGCAGCGG
TACCAGGAGC GGATGTATAG CAGTTGCTGG GTGTTGCCGG ACGATCTTCA TGCGGAGGCG
GCGCGTCGTT TGCAGCGCTG GATCAATGAC CACCCCAGCC CTGACACGAT GCACGAGCCT
TCGGCGCGGA TCGATGCAAT GATTGCCCGG TGGGTTTAG
 
Protein sequence
MPGISFDRAV DYYDATRGYP PGVAEQLRDA LVATLQLSQH ARLLEAGIGT GRIALPFIEK 
GYFYVGVDLA RRMMGQLCQK LDGRVHQAYL VCGDVMHMPA ANAAFDAVIM AHVLHLVADW
RWTLNEVRRV LHPGGAIVLL SDERNEQDGD PPAPRMQVQQ AWSAILDELN VPPDQRRESA
PHGLDERFQS HLEASGATVE RATLLTYRQS PQSVRSVAQR YQERMYSSCW VLPDDLHAEA
ARRLQRWIND HPSPDTMHEP SARIDAMIAR WV