Gene Rcas_2778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2778 
Symbol 
ID5540264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3595424 
End bp3595720 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content55% 
IMG OID640894904 
Productchaperonin Cpn10 
Protein accessionYP_001432867 
Protein GI156742738 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTCC AACCATTGGG CGATCGGGTA GTTGTCAAGC CCAAACCAAA AGAAGAAAAG 
ACCAAGGGCG GTGTCATCCT GCCTGATACA GCAACGAAAG AGCGCCCCAT GCAGGGCGAA
GTCATTGCAG TGGGACCGGG GCGGCGCACC GATGACGGGA AGCTGATTCC GGTGAGTGTC
GAGGTCGGTC AGCAGGTTCT GTTTGCCAAA TATTCCGGCA CCGAGTTCAA GATTGACGAC
GAGGAATATC TGATACTCCA GGAACGCGAT CTGCTTGGCA TTATCCAGGA GGCATAG
 
Protein sequence
MHVQPLGDRV VVKPKPKEEK TKGGVILPDT ATKERPMQGE VIAVGPGRRT DDGKLIPVSV 
EVGQQVLFAK YSGTEFKIDD EEYLILQERD LLGIIQEA