| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2657 |
|---|
| Symbol | |
|---|
| ID | 5540139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 3425402 |
|---|
| End bp | 3426331 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640894780 |
|---|
| Product | cysteine synthase A |
|---|
| Protein accession | YP_001432747 |
|---|
| Protein GI | 156742618 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.249918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCT ATGGCAGCAT TACCGAACTA GTAGGCAACA CACCGCTTGT GCGCCTGAAC
CGGGTGAATG ATACCCACGC CACGGTGGTC GCCAAACTCG AATGGTTCAA CCCGGCCGGC
AGCGTCAAAG ACCGCATCGG GCTGGCGATG ATCGAAGCCG CCGAGCGCGA CGGCATCATC
CGTCCCGGCG AGACGGTGAT CGTCGAGCCG ACGAGTGGCA ACACCGGCAT CGGGCTGGCG
TTCGTGGCGG CGGCGAAAGG ATATAAGGTC ATTCTGACCA TGCCCGAGAC GATGAGCATC
GAACGGCGCA AACTGTTGCG TGGCTTTGGC GCCGAGTTGG TGCTGACGCC TGGCGCCGAG
GGTATGCGGG GCGCGATTGC GCAGGCGGAA GCCATCGCCG CGGAATTACC GAACGCCTGG
ATTCCACAGC AGTTCAAGAA TCCTGCCAAC CCCGAAATCC ACCGCCGCAC GACTGCCGAG
GAACTGTGGC GCGACACCGA TGGGCAGATC GACATTCTGG TCTCTGGCGT CGGCACCGGC
GGAACGCTGA CCGGTGTATC GGAGGTGATC AAGCCGCGCA AGCCGTCATT CTATGTCGTT
GCCGTGGAAC CTGAAGCGTC GCCGGTGCTG TCGGGGGGCA AGCCCGGTCC GCACAAGATT
CAGGGAATTG GCGCAGGGTT TGTGCCCGAT GTGCTCAATA CCAACGCCTA TGACGAGGTC
TTTCGCGTGT CGAATGAGCA CGCTTTTGAG ATGGCGCGTC GCCTGGCACG CGAAGAAGGG
CTGATGGTCG GCATCAGTTC TGGCGCGGCG GCGTATGCGG CGCTGGAGAT TGCTCGCCGT
TCCGAAAATG CCGGTAAACT GATCGTTTTC ATCTCTGCAT CGAATGGTGA ACGCTATCTG
AGCACGCCGC TGTACGGCGA TGATGTCTAG
|
|---|
| Protein sequence | MRIYGSITEL VGNTPLVRLN RVNDTHATVV AKLEWFNPAG SVKDRIGLAM IEAAERDGII
RPGETVIVEP TSGNTGIGLA FVAAAKGYKV ILTMPETMSI ERRKLLRGFG AELVLTPGAE
GMRGAIAQAE AIAAELPNAW IPQQFKNPAN PEIHRRTTAE ELWRDTDGQI DILVSGVGTG
GTLTGVSEVI KPRKPSFYVV AVEPEASPVL SGGKPGPHKI QGIGAGFVPD VLNTNAYDEV
FRVSNEHAFE MARRLAREEG LMVGISSGAA AYAALEIARR SENAGKLIVF ISASNGERYL
STPLYGDDV
|
|---|
| |