Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2467 |
Symbol | |
ID | 5539948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3167709 |
End bp | 3169028 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640894597 |
Product | DNA uptake Rossmann fold nucleotide-binding protein |
Protein accession | YP_001432565 |
Protein GI | 156742436 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGAAC ACGAACTGAC GCCTGATACG CAGGCGATCC TGTTGCTCTG CGGAACATTC GGCAGACGCG GGTCGAGCGT CGCACCGCTG AGTGCAGCGG AGTATCATGC CCTGGCGCTC TGGTTGCATG CGCAGCAGAT GCGTCCAGGT GATCTGTTGC ACCCGGAAGG GGTTGCGTGC ATCCAATCGA TGCCAGGCGC TCCGGTAGTC CAGGAACGGC TGCTGGCGCT GCTGGCGCGC GGTGGAGCGC TGGCGCTTAC AGTCGAAGGC TGGAGCAACA AAGGTCTGTG GGTGATGAGC AGAAGCGATC CCGACTATCC GCAGCGGTTG CGGGCGCGTT TGGAACGCAT TGCACCACCG TTGCTCTACG GCGCTGGCAA CCGTCGTCTG CTCCAAAACG GCGGACTGGC AATCGTTGGA TCACGCCGCG TTACCGAAGA TGCAATCGCC TTTACCTGCG ATATTGCCCG CAGGTGCGCC ATACAGGGCA TACCGGTCAT CTCTGGCGCC GCGCGGGGGG TGGACAGCGA AGCGATGCAG GCAGCGCTTG CAGCAGATGG CGCTGCGGTC GGCGTGCTTG CGGATAGCCT GCTCAGAGCG GCAGTATCCG GGAAGTATCG TCAGGCGTTG CGGAACGGCA ACCTGGCGCT GGTCACTGCA TATGATCCCG AAGCGGGTTT TTCTGTTGGC AACGCCATGG GGCGCAATAA GTACATCTAT ACGTTGAGCG ATTATGGATT GGTGGTGAGT GCTTCATTAG GCGAAGGCGG AACATGGGAC GGCGCCATCG AATGTCTGAA AAAGCAGTGG GTTCCGCTCT TTGTCTGGTC GAGCGACAAA GCGGGACCGG GCAATCAACG CCTGTGCGAG ATGGGCGCTA TCTCGCTGAG TCAGGAGTTG TTGTCGAAGT ATGCATCGCT GCACCATCTC TTCAATGATC TATCCAGAGC ATCGGTTCCA ACACCCCTAC TGCGAGAGAG CGAAGCGATC AATGAGCATT CCGCCAGAAT GTCGCCTGGC AAGGGGATGA ACACGACTGC TGGCAACGAG CGCAGCGTCC ATGATACTTC ATCGCTCGAT CAGGCAACGC TGGCGTTGAT GCCTGTCGAT ACGAATGGCG CAGCACCGGC CATCGATTTG TTTCCGATTG TCTGGCCCCA TCTCGTCCAG GCGCTGCGAG TTGCACAGAC CGAGCGCGAG ATTGCGCAGC ACTGCGGCAT CGAGCCGCAG CAGGCACGTG CCTGGCTGCA ACGCGCTGTC CAGGAAGGTC TGGCGGTGAA GTTGACCCGC CCGATACGCT ACGTGTTGCA CAAACCATAG
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Protein sequence | MVEHELTPDT QAILLLCGTF GRRGSSVAPL SAAEYHALAL WLHAQQMRPG DLLHPEGVAC IQSMPGAPVV QERLLALLAR GGALALTVEG WSNKGLWVMS RSDPDYPQRL RARLERIAPP LLYGAGNRRL LQNGGLAIVG SRRVTEDAIA FTCDIARRCA IQGIPVISGA ARGVDSEAMQ AALAADGAAV GVLADSLLRA AVSGKYRQAL RNGNLALVTA YDPEAGFSVG NAMGRNKYIY TLSDYGLVVS ASLGEGGTWD GAIECLKKQW VPLFVWSSDK AGPGNQRLCE MGAISLSQEL LSKYASLHHL FNDLSRASVP TPLLRESEAI NEHSARMSPG KGMNTTAGNE RSVHDTSSLD QATLALMPVD TNGAAPAIDL FPIVWPHLVQ ALRVAQTERE IAQHCGIEPQ QARAWLQRAV QEGLAVKLTR PIRYVLHKP
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