| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2466 |
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| Symbol | |
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| ID | 5539947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3165037 |
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| End bp | 3167655 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894596 |
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| Product | polynucleotide adenylyltransferase region |
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| Protein accession | YP_001432564 |
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| Protein GI | 156742435 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase
[COG0618] Exopolyphosphatase-related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.779181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA TTCTCACCCA TAGCAACACC GACTTCGACG CGCTGGCGTC GCAACTGGCG
GCGACGCGCC TTTACCCCGG CGCGCTGGCT GTGCTCAACC CGCAACTGAA CGAGAATGTG
CGCGAGTTTG CTGCGTTACA CCGCGAAGAA CTGCCGTTTG TGCGCATGGG CGACCTGCCG
CGTGAACCGG TCACGCGCCT GATCCTGGTG GACACTGCCA CGGTTCCACG CCTCCCCTTG
TTGGGTGACA CGCCGATCCC GACGATTATC ATCGATCATC ATCGCCCCGA ACGCGATCTT
GCCCCGCACG AGGAGGTGAT CTATGCCGAC ACCGGCGCCA CCACAACCAT CCTGGTTCAA
CGCTTGATGG AACATCACCT GCCGCTGACC TCGGTCGAGG CAACGCTGCT GCTGCTGGGC
ATTTATGAAG ATACCGGAAA TCTCTCGCTG CCCGGCACGC GCGCGGTTGA TGTGGCATGC
GCTGCGTGGC TGCTCGAATG CGGCGCGCGG ATCGAGGCGG TTGGCGAGTT TCTTCGCCGT
CCGCTTTCGT CGGTGCAGGA ACAGGTGTTG CACCAGCTTG AACAGACCAT GCGCCTGGAG
GAGATCAGCG GCTGGACGGC GCTGTTTGCC TGGGCGCGCG TCGATGGACC GGTGCCGGAA
CTTTCGTCGC TGGCGCATCG CCTGCGCGAC TTGTATGCGC CGGCGGTCAT CGCGCTGGCG
ATTGCAACCG GCGATACCGG CACGCAACTG ATTCTGCGCG CCGGCGCCGA TACGTTCGAT
GCTGGCGCGC TCGCGGCGCG CTTCGGCGGC GGCGGGCATC GCTACGCCGC TGCTGCGTAT
GTGCGTGGTG TTGATGCGGA GACGCTGCTC GCCCGCACCG AAACCGCAGT GCGTGAGGTG
ATGCAACCGG CGCTGACCGC TGCCGATATT ATGACCCGTC CGGTGCATAC CGCGCCAATC
GATGCAACTG TGGCGCAGGC GGAGGAGTTG TTGCTTCGCT ACGGACATGG CGCGTTGCCG
GTCGTCAATC ACGATGGGGT GGTGCAGGGA CTCATTTCGC GCCGTGATCT TGATCGGGCG
CTGCGCCATG GGTTGCGCGA CGCTCCGCTG GCGCGCTACC TCTGGCACGG TCCGACGCTC
CTGCCGCCGG ACGCATCGCT CGCCACGGTG CGTAGCGCGC TCGCCGCCGA TAACGGTGAT
CGCACCGGTC GCTTGCTGGT TGTGGATGCG CACAAGCGCT TGCTGGGCAT TATCACCCGC
AGCGATCTGC TGCGCGCCTG GGCAGCCGGG CAGGACGCAG GCAAGATCGA CCACGCCATT
GTCAGCGAGA CGCTTGAACG TTTTCTCGAT CCTGCACTCC TGGCCATCCT GCGCCGCGCC
GGCGCCATTG CACAGCAGCG TGGCGCGGCG CTCTACATCG TTGGCGGCGC AGTGCGCGAC
ATGATCCTGG AACGGAAACC GGACGATCTC GATCTGGTGG TCGAAGGCGA CGCGATTGGT
CTGGCAGAAG CGCTAGCAAC TGAACTTGGC GGCGCGGTGC GCAGCCATTC GGCATTTGGA
ACAGCAACGC TGACCCTCAA ACGATTAGAT GGAGAGCCGC TTACCCTCGA CTTCGTCATG
GCGCGCACGG AGTTCTATGA GCGTCCCTCC GCACTGCCCG ATGTCGAAGC CGCATCGTTG
CGCCACGACC TGCACCGCCG TGACTTTACC ATCAATACGC TGGCGATCTG TCTCAATCCC
ACACGCTATG GCTGGCTCTA CGACTTCTAT GGCGGAAGGC GCGACATGAA CCGCAAACTG
ATCCGCGTGC TGCACAATCT GAGCTTCATC GACGATCCCA CGCGTATTCT GCGGGCAGCG
CGTCTGGCCG CGCGATTGGG GTTCGTCATC GAGCCGCGCA CCCGCGCTCT GATCGGCGAC
GCGCTCGAGC AGGGTGTGCT GGGGCGCGCC ACACCGCAAA GGATCATGCA TGAACTCCGG
CTTATTCTCG CAGAGGAGCA TCCTGAGCCA GCACTGGCGC TCCTCGACGA TTTGGGCGTG
TTGCGTGCGA TGCATCCGGC TCTGCGGTGG AGTCCTGCTA TCGCGGAATG GTTTGCGGCG
GCGCGACAGG CTGCTTTCCC GGACGCCCCG TTACCCGATC TGTACCTGGC GCTGTTGCTC
TACCCTCTGA TCGGCGACGA ACGCACTGCC TTCGCAGCAC GCTATCGCCT GCCGGCAAGC
GAAGCCCGCC TGCTGGCGGA CCTGACACTG GTGCATGAAC GTGTCGAGAT GTTGCGTTCT
GCGGCCGAAG GGTCTGATCA ATGGATTGCG GACAGCGCAA TAGATCGCGC GCTGCACGGA
ATTGGCATAG TTGCACTGCG CGCGGCGCAG ATTGCCGAGC CTCCGCCTGT CCCTCAGTAT
ATTGCACGCT ACATCGACTA TCTGCGCAGC GTCAAACTGG CAGTTGACGG AAAATTCCTC
GAGTCGCTTG GCTTGCGCCC GGGACCTCGC TTCGGTGAAC TGCTCGCTGC GCTTCGCGCT
GCGCACCTCG ACGGGATCGC CGTTACCCGT GAGGAGCAGG AAGCCTGGAT CCGGCAGGCA
GTTGTCGCCC AGAGCGCACC GGATGCCGGG CGCCGGTGA
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| Protein sequence | MELILTHSNT DFDALASQLA ATRLYPGALA VLNPQLNENV REFAALHREE LPFVRMGDLP
REPVTRLILV DTATVPRLPL LGDTPIPTII IDHHRPERDL APHEEVIYAD TGATTTILVQ
RLMEHHLPLT SVEATLLLLG IYEDTGNLSL PGTRAVDVAC AAWLLECGAR IEAVGEFLRR
PLSSVQEQVL HQLEQTMRLE EISGWTALFA WARVDGPVPE LSSLAHRLRD LYAPAVIALA
IATGDTGTQL ILRAGADTFD AGALAARFGG GGHRYAAAAY VRGVDAETLL ARTETAVREV
MQPALTAADI MTRPVHTAPI DATVAQAEEL LLRYGHGALP VVNHDGVVQG LISRRDLDRA
LRHGLRDAPL ARYLWHGPTL LPPDASLATV RSALAADNGD RTGRLLVVDA HKRLLGIITR
SDLLRAWAAG QDAGKIDHAI VSETLERFLD PALLAILRRA GAIAQQRGAA LYIVGGAVRD
MILERKPDDL DLVVEGDAIG LAEALATELG GAVRSHSAFG TATLTLKRLD GEPLTLDFVM
ARTEFYERPS ALPDVEAASL RHDLHRRDFT INTLAICLNP TRYGWLYDFY GGRRDMNRKL
IRVLHNLSFI DDPTRILRAA RLAARLGFVI EPRTRALIGD ALEQGVLGRA TPQRIMHELR
LILAEEHPEP ALALLDDLGV LRAMHPALRW SPAIAEWFAA ARQAAFPDAP LPDLYLALLL
YPLIGDERTA FAARYRLPAS EARLLADLTL VHERVEMLRS AAEGSDQWIA DSAIDRALHG
IGIVALRAAQ IAEPPPVPQY IARYIDYLRS VKLAVDGKFL ESLGLRPGPR FGELLAALRA
AHLDGIAVTR EEQEAWIRQA VVAQSAPDAG RR
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