| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2362 |
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| Symbol | |
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| ID | 5539843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3047442 |
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| End bp | 3049628 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640894494 |
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| Product | dehydrogenase-like protein |
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| Protein accession | YP_001432462 |
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| Protein GI | 156742333 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5322] Predicted dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.221453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAG TCCTCATCAT TCACCCCGGT GAAGGCGATA TGGTCTCGCC GGTCACCTTC
CTGAACCAGG ATGTCGAGGT GCGCCGCATT GGCTGCGGCG GTGACATCGC GCGCGCCCGC
GCCCTGATCG CCGAATACGA CGGTGCGGTC GATGCGATTG GATTGGATGG CATGCCTGCC
ATTCTGCGCC TGGGCGCCGC ACAGGTGCAG CACGTCATCG GCGCCGATTT GCCCGCCGTG
GCGCGGGTGA CGCCGGTCGT CGACGGTAGC GGCGTGCGCC CGGAACTCGA ACGCTGGGGC
ATCATCCTTG CCGAGCGCGC CCATCCGCTG ATCTTCAACC AGAAGCGGGT GCTGTTCGTT
CCCGGCGTCA ACCATGAAGG ATTGGCGCAG GCGCTGGGGC GGCGAACGCC AGCACTGCGC
TTTGCCGATC CGCAGATCTT CTTTGGTCTG CCCGACGCGC CGGGCGTGGG GAGTGCGCAG
ACTCTCGATC AGGCGGCAGC GCCGACGCTC GAAGCACTCA AGGAGGCGTC GTTCGAGACG
CTTGCCGGAC TCGTCGGCGC ACCGCACCAT CCGGGCAGTT TTGTCTGGGC GGATATTCTG
GCAGGGAACA TCGCCGCTAT CCGCCGGTTT GCGCCTGAAC GACTGGATCG TAAGATGGTC
ATCGTCGAAG CCGCAAGCGA CGAGGATATT GCCGATCTGC GCGCGCGCGG GGTCGAGACG
TTGATAACGC TTATGCCGTC GCTCAGCGGC AAAGGCGAGG TGGCGCGTCA CTCAGCCACA
ACCATCGAGG CGCTGCTGGC GGCGCTGCGC CCCGATCCAC GGGCGCCGCT GACCGAGGAC
ACCTACCTCG ATCTCCTGGC GAACCTGGAT TGGGCGCCGG CAGTCGTGAC GCTGCAACCG
GAAGCGGCTG GCGTCAACAA GTTTGCGTTT GTGATCCACC CGCTGAGCGT CCGATTCATT
CACGATTACC CGCCATTCTA CTGGACGCGC TACATTCCCG ATACGATTGT CGAAGCCGCT
GCCGCCTACG TCCCGCCGAT CTATGTCGGC AAAATTACCG GCGGACGCTC GCCAACGACC
GGGCAGCGCA TCGAGGGATA CCTGATTTCG CTTGGCGCAA CGCCGCGCCA GATGATGAAG
CATAGCCCGC GCTTCACCTA CAATCTGCTC AACCAGGCGG CGCACCTCGC CGAACGGCTT
GGCGCGCGCA TCATGGGACT GGGCGCCTTT ACGAGCGTCG TCGGCGATGC CGGGATAACG
GTTGCCAATG AAGCGGACAT CGCCATCACC AGCGGCAACA GCCTGACCGT CGCCGCAACC
CTGGAGACCG CCAAGATTGC CGCGCGCATG ATGGGCTATA AGGACTTGAG CCGTGGTCGA
ATCATGGTCA TCGGCGCGAC CGGCTCGATA GGGTCTGCCT GTGCGCGGCT GGCGGCGCAG
GCGACAAAGG ATGTCGTGCT GGTCTCGATT GAACCGGAGA AGTTGATCGA CTTGAAGCGC
CTGATCGAGC GCGAAACGCC AGGCTCGCGG GTCGTCATCT CGACCCATGC GAACAGTCTG
GCGGGTGAGT GTGATCTGAT CATCACGGCT ACCTCTGCCT TTGGACAGCG GGTGCTGGAT
GTGACCGAGT GCAAGCCGGG CGCGATCATC TGTGATGTAG CGCGCCCGCC GGACATCAAC
CCGGCGGAAG CGGCGCTCCG CCCCGATGTG CTGGTGATCG AAAGCGGCGA GGTGCTGATC
CCCGGCGATG TTGAGATCGG GTATGATATT GGGCTTCCGC CCAGGACGGT CTATGCCTGT
CTGGCGGAAA CGTCGCTGCT GGCGATGGAA GGGCGTTTTG AGGATTACAC GCTGGGGCGC
AACATCTCGC CTGAGCGGGT CAAGGAGATC TACCGTCTCT TCCGCAAGCA CGGGTACCGG
CTGGCGCCGC TGCGTTCTTT CGAGGAGTAT ATCACCGAAG AGCAGATCAT GCACAAACGC
AGACTGGCGG AGGAACTGCG CGCCGATCCC GACCTGTTCG CCCGGCGCAA GGCAGAAGCG
AAAGAGCGCT TGAAGTCAAT CCCGGAGATG GCGAAAGGGG TGCGCGCGGC GCGGCGCGGC
AAACATTCCG CAGCCTGGGG ATGGGCAGGC GTCGGCGCGG TGGCGTTGAG CCTGATTGCG
CTACGACGTC AGGCGCGGAT GCCATAA
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| Protein sequence | MKRVLIIHPG EGDMVSPVTF LNQDVEVRRI GCGGDIARAR ALIAEYDGAV DAIGLDGMPA
ILRLGAAQVQ HVIGADLPAV ARVTPVVDGS GVRPELERWG IILAERAHPL IFNQKRVLFV
PGVNHEGLAQ ALGRRTPALR FADPQIFFGL PDAPGVGSAQ TLDQAAAPTL EALKEASFET
LAGLVGAPHH PGSFVWADIL AGNIAAIRRF APERLDRKMV IVEAASDEDI ADLRARGVET
LITLMPSLSG KGEVARHSAT TIEALLAALR PDPRAPLTED TYLDLLANLD WAPAVVTLQP
EAAGVNKFAF VIHPLSVRFI HDYPPFYWTR YIPDTIVEAA AAYVPPIYVG KITGGRSPTT
GQRIEGYLIS LGATPRQMMK HSPRFTYNLL NQAAHLAERL GARIMGLGAF TSVVGDAGIT
VANEADIAIT SGNSLTVAAT LETAKIAARM MGYKDLSRGR IMVIGATGSI GSACARLAAQ
ATKDVVLVSI EPEKLIDLKR LIERETPGSR VVISTHANSL AGECDLIITA TSAFGQRVLD
VTECKPGAII CDVARPPDIN PAEAALRPDV LVIESGEVLI PGDVEIGYDI GLPPRTVYAC
LAETSLLAME GRFEDYTLGR NISPERVKEI YRLFRKHGYR LAPLRSFEEY ITEEQIMHKR
RLAEELRADP DLFARRKAEA KERLKSIPEM AKGVRAARRG KHSAAWGWAG VGAVALSLIA
LRRQARMP
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