| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2303 |
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| Symbol | |
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| ID | 5539784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2969476 |
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| End bp | 2970774 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894436 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001432404 |
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| Protein GI | 156742275 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.620777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGTC ACACGTCCCG CCAACAGATG CTCTGGACTG TCCTGCTCGT CTGGATTGTG
GCACTCATAG TGAGCGCCTG TGGTCAGGCG CCTGCCGCAC CGGCGCCGAC CACCGCTCCC
GCCGCACCGG CGCCGACCAC CGCTCCCGCC GCACCGGCGC CGACCACCGC TCCCGCCGCA
CCACAGGGAG CGCCGATCAA GGTCGGATGT TCGTTGCCGT TGACCGGCGC ATTCGCCGAT
ACCGGCATTT GGGTGGAGCG CGGCTACCGA CAGTGGGCTG AAGATGTCAA TGCCGCCGGA
GGATTACTCG GTCGTCCGGT GGAACTGATT ATCTACGACG ACGAGAGCAA GACCGAGAAT
GCCGTCAACC TGCTGACCCG CATCATCACC GTCGATCAGG TCGATCTGCT GTGCGGCGGG
TACCCCGGCA CAGCCGCCGC AGCGCAAATG GCAGTCGCCG AGAAGAATCA GATGGTCTAC
GTTTCGATGG GCGGGCATAT GGCGTCGTTC TCACAGGGGT TCACCTACGT CTTTGGCGCG
CCGCCACTGA TGGGGCAGTG GTGGTACGAA GGGTTGTACG GCTGGCTGGC AACGCTGCCC
GAAGCGGAAC GTCCGAAAAA AGCCGCGATT TTCACGATCA ACAATCCGGT CGGCGGCGCC
ATTTTGGAGC CAATGCCCGA AAAATTGAAG GCGCTGGGGA TTGAGATCGT CGTGAATGAA
CGGTACGACG TGCCGCTGAC CGATGCAGCG CCGCTGGTGA CGAAAGCAAA AGCAGCGGAA
GCGGACATCT TCTTTGCCAA CGGCTTCTTC CCCGATAGCG TGCAGATTGT GAAGGCGATG
CGCGCGCTCG ACTATAATCC CAAACTGATT GCGCAAGGGG TCGGATCGAT CATTCCCGCC
TGGGTGCAGG AATTGGGAAC GGACGGCTAC TACGTCTTCT CCGGCACGGC GGTTCACCCG
TCGCTGCCGT TCGAGGGCAT CTCCCGGCTG AACGACGTCG CCAAAGCGAA GTATGAAGCG
CCGGTTGCGC CGATCTATTT TATCTTCGGC TACGCCTGGA TGCAGGCATT GCAACGCGGC
GTTGAAGGGG CGCAGAGCCT GGATCAGACC GCCATCCGCG ACTGGCTGAA ATCGAATCAG
ATGACCACCG TCGCCGGAAC GTTCACCTTC GACGAGCGCG GTCTGCCGCC GCCGTACAAT
TACCTGACCC AGGTGATCGA CGGGAAGGTG GAACTGATCT GGCCCCCCGA CGTGCGCACG
AAAGACCCGA TCTATCCCAA ACCGGCGTGG GGGAAGTAG
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| Protein sequence | MTGHTSRQQM LWTVLLVWIV ALIVSACGQA PAAPAPTTAP AAPAPTTAPA APAPTTAPAA
PQGAPIKVGC SLPLTGAFAD TGIWVERGYR QWAEDVNAAG GLLGRPVELI IYDDESKTEN
AVNLLTRIIT VDQVDLLCGG YPGTAAAAQM AVAEKNQMVY VSMGGHMASF SQGFTYVFGA
PPLMGQWWYE GLYGWLATLP EAERPKKAAI FTINNPVGGA ILEPMPEKLK ALGIEIVVNE
RYDVPLTDAA PLVTKAKAAE ADIFFANGFF PDSVQIVKAM RALDYNPKLI AQGVGSIIPA
WVQELGTDGY YVFSGTAVHP SLPFEGISRL NDVAKAKYEA PVAPIYFIFG YAWMQALQRG
VEGAQSLDQT AIRDWLKSNQ MTTVAGTFTF DERGLPPPYN YLTQVIDGKV ELIWPPDVRT
KDPIYPKPAW GK
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