| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2301 |
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| Symbol | |
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| ID | 5539782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2967601 |
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| End bp | 2968587 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894434 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001432402 |
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| Protein GI | 156742273 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.281867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGCG CTCTGGCAGG TTCGTTCACT CTAACATCGC CAGATGTGGC AATCGGCGTC
GGGCTGGCGC TGGCGTTTGC TGCCGTTCCG CTTGCCGCTC CGAGCGCGTA TATCCTGAGT
TTTCTGCTCA CGATCTTCAT GTACGGCGCA CTGGCAGGCA GCTGGAATAT CATCGGCGGC
TATGCCGGGT ACCTGAGTTT CGGTCATGCG GCGTTCTTTG GGTTGGGCGC CTACACCACA
GCGCTCCTGC TCTTCTATTT CGGCTGGTCG CCTTTCCTGA CGCTGCCACT GGCGGGGGGA
GTTGCAGCGC TGTTTGCGGC GCTGGTCGGA TATCCCTGCC TGCGCCTGCG GGGACCATAC
TTCAGCCTGG TGACCCTCAT CCTTGGACTG GCAATGTATT CGCTCACGCT CAATCTGCCG
TTCACCCAGG GTTCGACCGG ATTGTTCCTG CCGTTTCTGA AGGTGGATAT CTACACCAGC
CATGTCATCT TCTATGAAAT CATGCTGGCG CTGCTGGTCG TTGTGACGGC AGTGCTGCGA
CAGATCGCGC GCACGAAAAT GGGTATCGGG CTGGCCGCCA TTCGCGAAGA TGAGGACGCG
GCAGGGACGC TCGGCGTCGA TGCAACTCGT CTCAAATTGC AGGCATTCAT GCTCAGCGCA
TTCTTGACGG GTCTGGTCGG GGGCGTGTAT TCTTACTATA AAAGTTATCT CGATCCCTCA
TTCGTCTTCG CAACATCGAT CTCAATAACG ATTGTCCTGA TGGCGCTCTT CGGCGGTCGG
TTGACATGGT ATGGACCGTT GGTCGGCGCG CTTGTCCTTT CGGCAGTCAA CGAAGTTCTG
ACAACACAAG CGCCGCCGCA AACGGCGCGG ATCGTGTTCG GCGCGCTGCT GATCGGCGTC
ATCATGTTTC TGCCGGATGG ATTGATGTCC ATCGTTCAAC GCAGGGTCCG GTCTCAGACC
CGATCCCACG GAGGAGGAAT ACGATGA
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| Protein sequence | MRRALAGSFT LTSPDVAIGV GLALAFAAVP LAAPSAYILS FLLTIFMYGA LAGSWNIIGG
YAGYLSFGHA AFFGLGAYTT ALLLFYFGWS PFLTLPLAGG VAALFAALVG YPCLRLRGPY
FSLVTLILGL AMYSLTLNLP FTQGSTGLFL PFLKVDIYTS HVIFYEIMLA LLVVVTAVLR
QIARTKMGIG LAAIREDEDA AGTLGVDATR LKLQAFMLSA FLTGLVGGVY SYYKSYLDPS
FVFATSISIT IVLMALFGGR LTWYGPLVGA LVLSAVNEVL TTQAPPQTAR IVFGALLIGV
IMFLPDGLMS IVQRRVRSQT RSHGGGIR
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