| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2300 |
|---|
| Symbol | |
|---|
| ID | 5539781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2966843 |
|---|
| End bp | 2967604 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640894433 |
|---|
| Product | cyclase family protein |
|---|
| Protein accession | YP_001432401 |
|---|
| Protein GI | 156742272 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1878] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.408163 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCT TCGATCTCAG CGTGCCGACC GAGATGAGTC CCAGCGAAGT CGAGCCGGTG
CAGGTCGAAC ATATCGACCA TAAGCAGACG GCAGCGTTCA TGGCGAGTTT CTTCGGGGCA
ACGGTTGATG ACCTGCCGGA AGGCAACGGA TGGGCGAACG ATCAGGTGAC GATTCGCGCC
CATGCCGGCA CGCACGTTGA TGCGCCATGG CACTATTACC CGACGTGCGG CGGCGCGCGC
GCCCGCACGA TCGACGAAAT GCCGCTCGAA TGGTTCTACG GCGATGGCGT CGTGCTCGAT
ATGCGTCACA AGCCGCGTGG CGGTCTCATC GAGATCGACG ATCTGCGCGC AGCACTCGAT
ACAATCGGGT ATACCCTCAA ACCGGGCGAT ATTGTGCTCA TCCAGACCGG CGCCGACAAA
CTGTGGGGAC AGGCGGAGTA TTTCGCGGCT GGCGCCGGGA TGAGCGCTGC TGCGACCCGC
TGGCTGATCG AACAGGGCAT CCGCACCATG GGTATCGACG CCTGGGGATG GGATCAACCA
TTCTGGGCAA TGAAGGAGCG TTACCAGCAG ACCGGCGACC CCTCGGTGAT TTGGGAGGCG
CACCGCGTCG GGCGCGACAT GGAGTACTGC CATATTGAGA AACTCGCCAA TCTGGACGCG
CTGCCACGCC CATTTGGATT CAAGGTCGCA TGTTTTCCGG TCAAACTGAC CGGCGGCAGC
GCCGGATGGA CGCGTGTTGT GGCGATCTTC GAGGATTTAT GA
|
|---|
| Protein sequence | MKIFDLSVPT EMSPSEVEPV QVEHIDHKQT AAFMASFFGA TVDDLPEGNG WANDQVTIRA
HAGTHVDAPW HYYPTCGGAR ARTIDEMPLE WFYGDGVVLD MRHKPRGGLI EIDDLRAALD
TIGYTLKPGD IVLIQTGADK LWGQAEYFAA GAGMSAAATR WLIEQGIRTM GIDAWGWDQP
FWAMKERYQQ TGDPSVIWEA HRVGRDMEYC HIEKLANLDA LPRPFGFKVA CFPVKLTGGS
AGWTRVVAIF EDL
|
|---|
| |