| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2248 |
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| Symbol | |
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| ID | 5539729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2898648 |
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| End bp | 2899952 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894381 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_001432349 |
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| Protein GI | 156742220 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.226593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.029127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGAT TGTCTCGCTG GATAACACTG TTACTGCTGG CAACCGCACT GATCGCGTGT
GGTAGCCCGC AAACCGCAGC GCCGTCACCC ACCAGTGTTC CGGCAGCGCC GACAAGCGCG
CCAACTGCGG CGCCAACCGC TGTGCCTACG GTTGAGCCGA CCATTGCGCC GACGGTCGCG
GTTCGTGAAG TTCCGACCGC TAATCTGACC GAAGGGTGTG TCAGCGAGTA CGACCCGGAG
ATCGACTACT TCCCGGAAAA AGTTTCGATC AGTGACTCGG TTGGCTGGAC GATTGAGTAT
TTCAACAACT ACAAAGTCAT AACCGTGCTC AATCCGTGGC GCGATGCCGA TGTGCAATTT
CGCTATGTGC TGGTGCAGTG TGGCACACCG CCGCCAACCG ATGTCGGCGA TGCGCTCGTG
ATCGACGTGC CGGTCAAGCG TATTGTCGCC ATGTCTACCA CCCATCTGCC GCACCTCGAC
GAACTTGGCG TGCTCGACAG ACTGGTTGGC GTTGATAGTT TTCTGTACAT CAACAATTTT
GCTGTGCGCA AAAAGATCGA TGCGGGCGAA CTGGTCGAAA TCGGCGGAGG CGGTCAGGTG
AATGTCGAGC AGGCGATCGA TCTTCAGCCC GACCTGATTA TGACCTACGG CGTTGGCAAC
CCGGAGTACG ACGCGCATCC CAAACTGCTC GAAGCCGGGC TGAAGGTGGT GCTGAACAGT
GAGTATATGG AAACCTCGCC TCTGGGGCGT GCCGAGTGGA TCAAGTTCAC GGCGGCGTTC
TTCAACCGTG AAGCCAGGGC GACAGAGGTC TACGACCGGA TTTCGAGCCG CTACAAAGAA
ATGGCAGCAA AAGCGCGCAA TGTCACGAAT AAACCGACCG TTTTCACCGG TGCACCGTTC
CAGGGAACCT GGTTCGTGTC AGGGGGCCAA AGTTACGCTG CCCAACTGCT GGCGGATGCC
GGGGCGATGT ACCTCTGGGC GGACGACACA TCGACCGGCA GCCTGCCGCT GAGTTTTGAG
GAAGTCTTTG AGCGCGCCCG CGACGCCGAC TTCTGGCTCA ACCCCGGCAT GTGGAAGAGC
CTCGCCGATG GCAAGGCGGA AGACGAGCGT TTCACGCAGT TTGCCGCGTT CCAGAAGGGG
AACGTGTTCA ATAACAATAA GCGCCTCAAC GAGAATGGTG GCAACGACTA CTTCGAGAGC
GGTCTGACCA ACCCCGATGT TGTGCTGGCA GATCTGATCA AAATCTTCCA TCCCGAATTG
CTGCCGGACC ACGAGTTGTA CTTCTACCAG AAATTGGAGC CATAG
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| Protein sequence | MHRLSRWITL LLLATALIAC GSPQTAAPSP TSVPAAPTSA PTAAPTAVPT VEPTIAPTVA
VREVPTANLT EGCVSEYDPE IDYFPEKVSI SDSVGWTIEY FNNYKVITVL NPWRDADVQF
RYVLVQCGTP PPTDVGDALV IDVPVKRIVA MSTTHLPHLD ELGVLDRLVG VDSFLYINNF
AVRKKIDAGE LVEIGGGGQV NVEQAIDLQP DLIMTYGVGN PEYDAHPKLL EAGLKVVLNS
EYMETSPLGR AEWIKFTAAF FNREARATEV YDRISSRYKE MAAKARNVTN KPTVFTGAPF
QGTWFVSGGQ SYAAQLLADA GAMYLWADDT STGSLPLSFE EVFERARDAD FWLNPGMWKS
LADGKAEDER FTQFAAFQKG NVFNNNKRLN ENGGNDYFES GLTNPDVVLA DLIKIFHPEL
LPDHELYFYQ KLEP
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