Gene Rcas_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2079 
Symbol 
ID5539559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2669224 
End bp2670246 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content62% 
IMG OID640894214 
Productrhodanese domain-containing protein 
Protein accessionYP_001432183 
Protein GI156742054 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAGAA CGCTGTTGCG GACTGCCGGC GCCGCCGTTG CCGGCGCACT CGTGACGCTC 
ATCATCGTGG CGATCACGTT CTCCACTCGA CCGCAACCAG AGGCGACGCC AACCGTTGCG
CCGACCGCTC CTGCCGCTCC TGTGGTTGCT CCGTCGCCCC GTGAACCGCG CAAATTCGAG
GATGTCGTCG TCAGCACCGA ATGGCTTGCG CAGAACCTCG ACAACCCGAA GGTGCGCGTG
ATTGAAGTCA GCGTGGCGCC GGGGGTGTAC GAACGGGGTC ATATTCCCGG CGCGGTCAAC
TTCGTCTGGA CTACCGATTT TGTCGATACG GTGTCGCGCA ACATCATTGC GCCGGAGCGC
TTCCAGGAAC TGGCGCGCGC CGCCGGTATC GACAACGACA CAACCATCGT GCTCTACGGC
GATAACAACA ACTGGTTTGC CGCCTGGGGC GCGTGGGTCT TCCGCCAGTA CGGCGCTGAG
GATGTGCGAT TGCTCGATGG CAGTCGCAGC AAGTGGGAGG CTGAGAACCG CGAACTCTCG
ACGCGCGCGC CGACCTATCC GCCGGGCAAT TTTACCGTCC GGCAGCGTAG CGATCTGCGG
GTGTTTCTGC CGGATGTCCT GAAAGTCGTG CGTGGCGAGG ACAATCGGGT ATTGGTTGAT
ATTCGCTCGC CGGATGAGTT CAGTGGGAAG ATTTTTGCGC CGGAAGGGTT CCAGGAACTG
GCAGTTCGCG CGGGTCACAT TCCCGGTGCG GTGAATGTGC CGTGGAAGCA GGCGCTCAGG
GACGATGGCA CATTCAAGAG CGTTGAGGAA CTGCGCAAAC TGTATGCTGA TGCCGGCGTC
GATGGCAGTA AGCCGGTCAT TACGTACTGC CGGATCGGTG AACGCGCAAG CCATACCTGG
TTCGTTCTCA GCGAAATCCT GGGGTATCAA GCGGCGCTCT ACGACGGGTC CTGGACGGAG
TATGGCAACA GCGTCGGCGT GCCGATCGCC AACCCCGCCG GTACGATTTG GGGCGTGAAG
TAG
 
Protein sequence
MDRTLLRTAG AAVAGALVTL IIVAITFSTR PQPEATPTVA PTAPAAPVVA PSPREPRKFE 
DVVVSTEWLA QNLDNPKVRV IEVSVAPGVY ERGHIPGAVN FVWTTDFVDT VSRNIIAPER
FQELARAAGI DNDTTIVLYG DNNNWFAAWG AWVFRQYGAE DVRLLDGSRS KWEAENRELS
TRAPTYPPGN FTVRQRSDLR VFLPDVLKVV RGEDNRVLVD IRSPDEFSGK IFAPEGFQEL
AVRAGHIPGA VNVPWKQALR DDGTFKSVEE LRKLYADAGV DGSKPVITYC RIGERASHTW
FVLSEILGYQ AALYDGSWTE YGNSVGVPIA NPAGTIWGVK