Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1985 |
Symbol | |
ID | 5539463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2543682 |
End bp | 2543963 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640894120 |
Product | CRISPR-associated Cas2 family protein |
Protein accession | YP_001432091 |
Protein GI | 156741962 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.503159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTACG TAATCGCTTA CGACATTCCG GACGACGCGC GACGCCTGAA ACTGGCGAAC GTACTCGAAG GATTCGGGCA GCGCGTGCAG CGCAGCGTCT TCGAGTGCGA CCTGACCGAG CGCGAATACC GCGCACTGAT AAAAAAAGTC GAGCGCGTCG TTAACCTAAA CGAAGGGGAC AGCGTGCGCA TCTACCGATT GTGCGGCGCA TGCGTAGCGA ACGTCGACGT CAGAGGAGAA GGACCGCCGG TGGAAAAGAG CGTTGACATC TATATCGTCT GA
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Protein sequence | MLYVIAYDIP DDARRLKLAN VLEGFGQRVQ RSVFECDLTE REYRALIKKV ERVVNLNEGD SVRIYRLCGA CVANVDVRGE GPPVEKSVDI YIV
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