Gene Rcas_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1959 
Symbol 
ID5539437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2509104 
End bp2509727 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content55% 
IMG OID640894094 
Producthypothetical protein 
Protein accessionYP_001432065 
Protein GI156741936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.95171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACA GCGATTTCAA ACTGCCCGAA CTGAAGCGTC GCTTTAACCT GATCCTGGAA 
GAAGACGTCG ATCTCTTCAG CGCAGCGCCA GAAACGCCGG TCAGCGACTG GCTTCGGGCG
ACGTTGCATG AGACGCTCTC GGTCGCGTTG GCGATCAATA CCGAGAAAGG GCGCTCTGAA
TTGATCATTG CGCCCATCCT GGTGGAGTTG CGCAAACAGA CCGGGTACAC CGTCAGCTTC
TTTTCCGGCG TCGATTTTAC CGTTGACCCG TCTCAGGGAT TGAACGGCGT GTGTGATTTT
ATTGTCTCAC TGTCGCCGGA GCAGCTCTTC GTCAGTGCGC CGGTGCTGAT TATATTCGAG
GCGAAGAATG AGGATATCAA GGGCGGCTTT CCGCAATGCA TCGCAGCGAT GATCGCAGCA
CAGCGCTTCA ATGAGCGCGA AGGAAACGCT CTTCCGCTCA TTCACGGCGC CGTTACGACC
GGCACGAACT GGCGCTTCCT GCAATTGGAT CAGAACGTCG TGCGCATCGA TCGTCGCGAG
TATTACGTCG ATAATCTTCA GAAACTGCTT GGCATCCTGA TGACGATAAC CGGAAAACTG
GCGGTTACCC CGACGCTTCC CTGA
 
Protein sequence
MSYSDFKLPE LKRRFNLILE EDVDLFSAAP ETPVSDWLRA TLHETLSVAL AINTEKGRSE 
LIIAPILVEL RKQTGYTVSF FSGVDFTVDP SQGLNGVCDF IVSLSPEQLF VSAPVLIIFE
AKNEDIKGGF PQCIAAMIAA QRFNEREGNA LPLIHGAVTT GTNWRFLQLD QNVVRIDRRE
YYVDNLQKLL GILMTITGKL AVTPTLP