| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1948 |
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| Symbol | trpA |
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| ID | 5539426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2497155 |
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| End bp | 2497940 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894084 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001432055 |
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| Protein GI | 156741926 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.54556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCGCA TTGCCGATAC CTTTGCCCGA TTGCGCGCTG CCGGTCGCAC AGCGCTGATG
CCTTATCTGA TGACCGGCTA TCCCGAGCGC GATTCGGTGC TGGACCTTGC GCCGGCGCTG
GAGGATGCCG GCGCCGATCT GTTCGAGCTT GGCGTCCCGT TTTCCGATCC GCTCGCCGAT
GGCGCGACGA TTCAACGCGC TTCTGAACGC GCGCTTGCGA ATGGTGTTCG TCTCGAGCAC
TGCATTGCAA CCATTGCCGT ATTGCGCGAA CGTGGCGTGC GCGCGCCGAT TGTGCCAATG
GGGTATTACA ACCCGTTTTT GCAGTATGGT CTCGCGCGTC TGGCGCGCGA TATGGCAGCC
GCCGGCGCGG ATGGGTTGAT TATCCCTGAT TTGCCGCCGG AAGAAGCGCA GGAGTGTCAC
GCCGCCTGCC GCGAATATGG TCTCGATCTG ATCTTCTTCG TCGCACCCAC GACCCCTGAT
GAGCGCATTG CCCGCATTAC TGCGCTCGCC AGCGGTTTCA TCTATTGCGT TTCGCTGACC
GGCGTCACCG GCGCGCGGCG CGAATTGTGG AGCGGACTGC CCGCCTTCCT GGAACGGGTG
CGGCGTCACA CCACCCTGCC GCTCGTTGTC GGGTTCGGCA TCAGCAGCGC CGATCATGTG
CGTGAGGTCG GCAGGCATGC GGCAGGTGCG ATTGTCGCCA GTGCGCTGAT CAACGTTATC
GAACAGTCGC ATCCTGGCGA ATATGTCGCG CGCGCGGCTG AGTTCGTGCG GTTGTTGCGC
GGCTGA
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| Protein sequence | MSRIADTFAR LRAAGRTALM PYLMTGYPER DSVLDLAPAL EDAGADLFEL GVPFSDPLAD
GATIQRASER ALANGVRLEH CIATIAVLRE RGVRAPIVPM GYYNPFLQYG LARLARDMAA
AGADGLIIPD LPPEEAQECH AACREYGLDL IFFVAPTTPD ERIARITALA SGFIYCVSLT
GVTGARRELW SGLPAFLERV RRHTTLPLVV GFGISSADHV REVGRHAAGA IVASALINVI
EQSHPGEYVA RAAEFVRLLR G
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