Gene Rcas_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1897 
Symbol 
ID5539375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand+ 
Start bp2438563 
End bp2439126 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content59% 
IMG OID640894034 
Producthypothetical protein 
Protein accessionYP_001432005 
Protein GI156741876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0219114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTCC GTCTGTTGCT GGCAGGTGTG GGATTAGCGC TCGTAGGTGT ACTGGTGGCA 
GCGTTCGGGT TGATCAACTG GAGCAGCGCA ACCGGAACGC GCGAAGCGCA GATGCGCGCT 
GAGCAGGTAT GGTATGCGCA GCCACGTCAT CACTACCGGA TGCTCATTCG GCAACGGACG 
CGCACCGGCG TTTGCGAGCA GGATCTCGAG ATCCGTGACG AGCGCGTGCA AACGGTGCAT 
CTCAATCAGT GTGCGCAACC GCCAATCTGG ACGGTGCCTC GCCTCTTCAG TTGGGTGAAG 
CAGCTTGGTC ATCCGTCAGG TCTCTGCTAC CCGTCTTCCC TTCAGTGCAC CTGTCGCGTA 
TCCACTCACC TTGAAGTGAC GTTCGATCCA CAGTCGGGAT ATCCCGCACA GGTTCGTTAT 
GAATGGGGAT TGCGCCCGAA TTGGGAGAAT GTGGACTACT GGCAATCGCT CGTGTTCCGT 
AGCGATCGGA TCGATTGCGC TCGTCGCACG CACGGCGGCG GCGCAGTCGA ATTGACCGTG 
GTTGCGTTCA CGCCGCTTCC CTGA
 
Protein sequence
MRFRLLLAGV GLALVGVLVA AFGLINWSSA TGTREAQMRA EQVWYAQPRH HYRMLIRQRT 
RTGVCEQDLE IRDERVQTVH LNQCAQPPIW TVPRLFSWVK QLGHPSGLCY PSSLQCTCRV 
STHLEVTFDP QSGYPAQVRY EWGLRPNWEN VDYWQSLVFR SDRIDCARRT HGGGAVELTV 
VAFTPLP