| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1793 |
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| Symbol | |
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| ID | 5539271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2300238 |
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| End bp | 2303753 |
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| Gene Length | 3516 bp |
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| Protein Length | 1171 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893932 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001431903 |
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| Protein GI | 156741774 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.18567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCGA TGACGACGCT GAAGACGACA ATAACGACGG ATTTCGGACC ACCCCAAACC
GTCTCCCGTC CGCTCCCCGG CGGTATCTGG GCTGCGGTCC GGCACGGCGT TGCTGCGTCG
CCCACCCCAA CAGTCCAGGT ATATGCGCTC ATTCGGAAAC GGATTACTCA CCGGTCAGTA
TCAGACCCTC TGTGGACCAT CCTGCGCGAC CGCACCGATC CGGCAAAGTA CCGCCCCCAT
GCCATTCCCG ACGTTGCCGC CGATCCGGTG AGCGAAGGCG ATCAGACGCT CTATATCGTG
CGCAGTCCGC GTGGCAATTA TATTCGCCTG ACCGAAGCGC AACACGAGGT CTGGCGTGCA
ATGGATGGCA CGCGCACCGT CTCCGAACTT GGGCTTGCCG CCTTCCGTCA GCATGGGCTG
ATCCTGCCGA TTGGCGAACT GGTCGCCGGT CTCAAGGCGG AAGGTTTGTT GTTCGACCAG
CCAACTGGCA TCTATCGCGC CATCAACGAC GCGATTACCA GAGGGACGAC CGGCGCCTGG
AGGCGTCGCT TGCGATGCAT CCTGACCGGC GCAACGCTGG CGCTGCCCGG CATCGACGCT
TTCTACGATA GGGTGTATCG TTGGGGCGGC AGATTGCTCT TTACTCGCGT TTTTGCGCTC
CTCGCCGGAA TGATCGCGCT CATTGGCATC ATCACGTTTG GGCTGGCAAT GAGCAGCGGT
TCGGAAACAT ATGAGGTCAT TCGGCTGAAC GACTCGGTGA CGCTGGGGCT GGCGGCGCTC
TGGGCAGTCA CCCTGCTATC CTTCGTGGTG CATGAGAGCG CGCACGCACT GGCGGTCAAG
CATTTTGGAC GCACTCTGAC TCGCGGCGGC GTGATGCTGT ACTATGGCTT GCCTGCCGCT
TTCGTCGATA CCAGTGACAT CTGGCGCTCG CCGCGCCGTG CGCGCGTCAT GGTATCGGCA
GTCGGTCCTG CGGCAGACCT GCTGGTCGGC AGTCTGGCAG CAATTGCCGC TTACCTGTTG
CCGGATACTC CTGTTGGCGC AATTGCTTAC AAACTGGCGT TCACCAGTTT TGTATCGAGT
GTGTTCAACC TGAATCCGCT CCTCGAACTC GACGGCTACT ATATCCTCGT CGATCTGCTG
CGGATGCCGG ACCTTCGGCG TTCGGCGCTG GCATATGTGC GTGGTCCGCT GTGGGAAAAA
CTTGGCGCCC ACCTGCGCAT GCGCTCGACA CACTGGATGC AACGCATGGG CAAACGTCCC
CCGGCAACGA CGCTCAACCT CGATGAGCGC ACATTGCCGC TTAGCCGCAA AGAACGCATC
TACGCGATCT ATGGTGCAGC CACGACGCTC TATACCTTTC TGGCGATCAT CGGTGCGGTA
TGGTTCTGGC AGCAACAGAT TCTCGAGCCA GCCCTGGAGT TGTTGCGCGG CATCTGGTGG
CAACGACTGA TTGGCATGGC ACTGATCCTG ACGGTCGTTC TCCCGGCAGT CATAGCCATT
CTGCTTGCGT TCTGGGAAGC GGGGCAGACC ATGGTCGGCT GGTTGGTTCG ACGCGGATAT
GGGCGTCAGC CTGGGCTGCT CGCTGCTGTT GGGGTCTTGC TGGCATTGAT CGCATCACTG
GCGGTCATTG GAACCAGAGA CGGTCCGTGG GGATGGGTCG CCCTGGCGCT CGGACCGGCG
CTCTGGATTG TAGCGCTCAA TGCGCTGCTG GCTATTCGGA CATACTATCG CGGCGCGACT
ATCTATCCGG CAGTACTGGC GCTGGTTGTG ACCACGACGC TTGCCGGGAT GGCCGGTATT
GCGCGAGCGC TGCCGTTGCC GCCCGGCATC TGGGTCATCC TCGATGGTCT GGCGTTCGTT
GGATTGCTGG TCGCGGGGTT TACCGTGCTG CTCGATGCGG ACCTGCGCAC GACACCGTTG
CACGAGTTGC TGGGAACAGC CATTTTGTTG ATGATAGCCT TTGCCATCGG CGGGGTAGCG
CTCTTCAGCG TCCAGACCGT CTATCCGACG ACAGGCGCAT TAGCGTGGCT GGCAATGGCG
GCGCCAGCCT ACTTTGGCGC GCTGGCGCTG GCGCTGCTGC TTCAGCACCT GTTTGGGCTG
GCAGACTCGC GGTTAATCTG GTCATGGGCG CTGCTCTGGG CAAGCACCCT GGTGAAAACC
GCCGGTTACA TCGCCGACTT GCGCGGAGAC GGGCTGGCGC TCGATGTGCT AGGAGCGGGA
TTGTGGACGA CGGCATGGCT GGTGCATGGG GCAATCCTCC GTCACCTGAC ACTGCGTGAG
TTCCACTGGG AGCACATTCC GAGCATGAAC GAAAGCGACC GTCTGGTGCG CGCATTCCAG
TTGACCTACT GCGGTTGTTA TCGGTTGCTG CACTCGGTGT ACGGCGAACG ACGCGCGCGC
GCCCTCGATG ATCGAATGGA CATTCTGGCA GCCACGGCAA ACTGGGAAAT CACCCTGGAT
CATGAGCAGG CGCGAATTGG GCAACAGGTC ACGACGTTGC CCATTGCTGT GCAGGGCGCA
CGGTTTGCCG AAGTATTGCG TTACACAGTC GCCGAGATTG AGCAGATCGC AGGCGCTGCA
TTTGCGCGGC GCTGTATTCA GGCGGCATAC GATGCGCTGC CCTGGCCCGA ACGTGAAACA
GCCAGCCGGC TCTGTTTTCC CGACACGCCA TGGGCGCGTG AGTTGTCGAG TTCGTTCGGC
GATATGCGTG CTGCACGCCT GCGATTGCTC CGACAGGTTG ATATTTTTCT GCATTGCGAC
GACGACGAAC TGGAAGCGCT GGTTGCCAGC GTCATCGAGC AAACGCTTGC CGGCGGCGCG
ACCGTGCTGC GCGCCGGCGC TGCGGCGCCG GGAATCTGGA TCATCGAAGC CGGTGAGGTT
GTTGCGCGGC GCGGGGAGCG TATTGTTGCG GAACTCCATC GCGGTGATGC GATCGGCGCG
GCAGAGGTGA TGGGCAACAC ACCATGCGCA TACACCTACC GCACGACCAT GACATCAAGC
CTGCTCTTTT TGCCAGCCGA GGAGTTCTTT CATCTCACTG CCGGCCGCGT ACCGCATGCC
ACAGCCGGTC TGGAATTGAC TGAGGTGCTC CGCCTGCTGG AACAGGTGCC ATTGTTCGCC
GACCTCCCAC GCAACACGCT GCGCGGTCTG GCAGCGATTG CAGAACAGCA CACCTACCCT
GCGCGCACGG TCATTGTGCG CCAGGGCAGA CCCAGCGGCA CTTTTTTCAT TATTCGCAAA
GGAACAGCAG CAGTCGTCCG GCATGATTCA TCCGCCGCCA ACGAAGGGCA ATCGCGCGCA
CGCCTGATCG CGCGCCTGGG ACCACAGGAG TTCTTCGGCG AACTCGAACT GCTACGCAAC
GCTCCACCGG TAGCAAGCGT CATCGCCCTT ACGTCGCTCA CCACGCTAAC GCTGCCGCAC
GCTGCAATCC AGGCATTGGT GCACAACGAC GGCAGCGTAT CACGACAACT GGAACGGATC
GGTACCGGAA GGCTCAAGGC GCTAGAGAGC AGGTGA
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| Protein sequence | MMAMTTLKTT ITTDFGPPQT VSRPLPGGIW AAVRHGVAAS PTPTVQVYAL IRKRITHRSV
SDPLWTILRD RTDPAKYRPH AIPDVAADPV SEGDQTLYIV RSPRGNYIRL TEAQHEVWRA
MDGTRTVSEL GLAAFRQHGL ILPIGELVAG LKAEGLLFDQ PTGIYRAIND AITRGTTGAW
RRRLRCILTG ATLALPGIDA FYDRVYRWGG RLLFTRVFAL LAGMIALIGI ITFGLAMSSG
SETYEVIRLN DSVTLGLAAL WAVTLLSFVV HESAHALAVK HFGRTLTRGG VMLYYGLPAA
FVDTSDIWRS PRRARVMVSA VGPAADLLVG SLAAIAAYLL PDTPVGAIAY KLAFTSFVSS
VFNLNPLLEL DGYYILVDLL RMPDLRRSAL AYVRGPLWEK LGAHLRMRST HWMQRMGKRP
PATTLNLDER TLPLSRKERI YAIYGAATTL YTFLAIIGAV WFWQQQILEP ALELLRGIWW
QRLIGMALIL TVVLPAVIAI LLAFWEAGQT MVGWLVRRGY GRQPGLLAAV GVLLALIASL
AVIGTRDGPW GWVALALGPA LWIVALNALL AIRTYYRGAT IYPAVLALVV TTTLAGMAGI
ARALPLPPGI WVILDGLAFV GLLVAGFTVL LDADLRTTPL HELLGTAILL MIAFAIGGVA
LFSVQTVYPT TGALAWLAMA APAYFGALAL ALLLQHLFGL ADSRLIWSWA LLWASTLVKT
AGYIADLRGD GLALDVLGAG LWTTAWLVHG AILRHLTLRE FHWEHIPSMN ESDRLVRAFQ
LTYCGCYRLL HSVYGERRAR ALDDRMDILA ATANWEITLD HEQARIGQQV TTLPIAVQGA
RFAEVLRYTV AEIEQIAGAA FARRCIQAAY DALPWPERET ASRLCFPDTP WARELSSSFG
DMRAARLRLL RQVDIFLHCD DDELEALVAS VIEQTLAGGA TVLRAGAAAP GIWIIEAGEV
VARRGERIVA ELHRGDAIGA AEVMGNTPCA YTYRTTMTSS LLFLPAEEFF HLTAGRVPHA
TAGLELTEVL RLLEQVPLFA DLPRNTLRGL AAIAEQHTYP ARTVIVRQGR PSGTFFIIRK
GTAAVVRHDS SAANEGQSRA RLIARLGPQE FFGELELLRN APPVASVIAL TSLTTLTLPH
AAIQALVHND GSVSRQLERI GTGRLKALES R
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