| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1792 |
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| Symbol | |
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| ID | 5539270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2298941 |
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| End bp | 2300215 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893931 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_001431902 |
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| Protein GI | 156741773 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.787858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA TTCTTGACGA ACTCCGCTGG CGCGGGCTGC TCTACGAGAG CAGCGACGGT
CTGGACGATC TGTTGGAGCG CGAACGGGTG ACGCTCTACA TCGGCTTCGA CCCCAGCGCC
GATAGTCTGC ACATCGGACA TTTGTTGCCA CTGCTCACCC TGGCGCGTTT CCAGCGCTGG
GGGCATACGC CGATTGCACT GGCTGGCGGC GGCACCGGTC TGATAGGCGA TCCGAGCGGC
AAAACGCAGG AACGTCCCTT ACTGAGCAAA GAGCAGGTCG CGGCAAATGT CGAGGCGATC
AAACGCCAAC TTGCTCAGTT TCTCGACTTC AACGCTGGCG ACCATTCGGC GATGCTGCTC
AACAACGCCG AATGGCTGAC GCGCCTGTCG CTCATGGACT TTTTGCGCGA TGTCGGCAAG
CATCTGACGG TCAACTACAT GCTGGCCAAG GACTCGGTGC GCTCACGGAT GATGAGTGAA
ACCGGCATTT CATTTACCGA GTTCAGCTAC ATGCTCCTCC AGGCATACGA TTTTGCCTAT
CTCTTCGAAC ACTATGGCTG TAAACTCCAG GCAGGCGGCA GCGATCAGTG GGGGAACATC
ACGGCCGGCA TTGAACTGAT CCGTCGCACG TCAGGGCAGA AGGCGTATGG GCTGGTCTAC
CCGCTGGTGA CGAAGGCGGA CGGTACAAAG TTCGGCAAGA CCGAGTCGGG TGCGGTGTGG
CTCGACCCGA AGCGCACGTC GCCTTACCGG TTCTACCAGT TCTGGTACAA CGTCGATGAT
GCGGATGTCG GGAAGTATCT GCGCTACTTT ACCTGGTTGA GCGCTGCCGA GATCGAAGAA
CTGGAACAGA TCACGGCGAG GCAACCGGAG CGCCGCACTG CACAGCAGCG CCTGGCGCGC
GAGGTGACGC GCATGGTGCA TGGCGAAGCA GCGCTGGCGC GCGCCGAGGA GGCGTCGCAG
GCGCTCTTCG GCGGGTCGCT GGCAAGCCTC AGCGCCGATG ATGTGGCGGA TATCTTCGAG
GATGTGCCTT CGATTACGCT TCCGCGCCAG GACCTCGAAG GTGACGGGAT GAGCCTGATC
GATGCGCTGG TGCGCTGTGG CATCGCTACC TCGAAGAGCG ACGCGCGACG CGCTATCGAA
GGTGGCGGCA TCTATATCAA CAATGTCCAG AGCGCCGATG TGGGGCGTCG GCTGACGCTC
CACGATAGCA TCGATGGACA GTGTATCGTG TTGCGCAAAG GGCGCAGACA TTATCACCTG
ATCAGGCTCG TGTGA
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| Protein sequence | MTTILDELRW RGLLYESSDG LDDLLERERV TLYIGFDPSA DSLHIGHLLP LLTLARFQRW
GHTPIALAGG GTGLIGDPSG KTQERPLLSK EQVAANVEAI KRQLAQFLDF NAGDHSAMLL
NNAEWLTRLS LMDFLRDVGK HLTVNYMLAK DSVRSRMMSE TGISFTEFSY MLLQAYDFAY
LFEHYGCKLQ AGGSDQWGNI TAGIELIRRT SGQKAYGLVY PLVTKADGTK FGKTESGAVW
LDPKRTSPYR FYQFWYNVDD ADVGKYLRYF TWLSAAEIEE LEQITARQPE RRTAQQRLAR
EVTRMVHGEA ALARAEEASQ ALFGGSLASL SADDVADIFE DVPSITLPRQ DLEGDGMSLI
DALVRCGIAT SKSDARRAIE GGGIYINNVQ SADVGRRLTL HDSIDGQCIV LRKGRRHYHL
IRLV
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