| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1788 |
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| Symbol | |
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| ID | 5539266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2295554 |
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| End bp | 2296165 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893927 |
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| Product | cation efflux protein |
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| Protein accession | YP_001431898 |
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| Protein GI | 156741769 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACG AAACGTCCTC ATCGCGCGCG TCGACCGGTG CATCGCTGCG GCGGGCAGTG
GGTTTTGTGG CGCTGGCAAA CTTCGCCTAT TTTGGAGTGG AGTTTGCTAT TGCTCTTGCT
ATTGGCTCGG TCGCACTTTT TGCCGATAGC ATCGACTTTC TCGAAGACAC GGCTTTAAAC
GTGTTGATCC TGGTTGGGCT GGGATGGTCC CCTATCTGGC GTGGACGCCT GGGGATGATC
CTCGCCGCCA TTCTCCTGAT CCCCGGTCTG GCGACGCTCT GGAAGGCGTG GGAGAAATTT
CTGCACCCCA CCCCGCCCGA TCCGGCATGG CTTGCTGTGG CAGGGGTGGG GGCGCTGGTT
GTGAACCTGA CCTGCGCACT GGCGCTTGCC CGCCACCGGA AGCATCACGG GAGTCTGGCA
AAAGCCGCCT TTCTCTCCGC GCGCAATGAC GCACTGGCAA ATGTCGCTAT TGTGGCGGCT
GGACTCCTGA CCGCCGTGAT CCTCTCCGGT TGGCCCGATC TGATTGTAGG ATTGGGAATC
CTGGCGATCA ATGCCGACGC TGCGCGGCAG GTCTGGATCG CAGCGCGGCG TGAAGTGCGC
GCTGAGAACT GA
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| Protein sequence | MTDETSSSRA STGASLRRAV GFVALANFAY FGVEFAIALA IGSVALFADS IDFLEDTALN
VLILVGLGWS PIWRGRLGMI LAAILLIPGL ATLWKAWEKF LHPTPPDPAW LAVAGVGALV
VNLTCALALA RHRKHHGSLA KAAFLSARND ALANVAIVAA GLLTAVILSG WPDLIVGLGI
LAINADAARQ VWIAARREVR AEN
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