Gene Rcas_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1661 
Symbol 
ID5539137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2142358 
End bp2143113 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content60% 
IMG OID640893798 
ProductDSBA oxidoreductase 
Protein accessionYP_001431771 
Protein GI156741642 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00396912 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCTCAA CGAAAGGGAT ACACCGCGTG ATAAAGCAAC ATCAAGTCCT TCCTCTCGCC 
ATTATCCTCC CGATCATCAT TGCTGCGTGT GGCGGAACGC CATCCGCCGC ACCCACGCCG
CCACAATCGG CGCCGATCGT TTCCACGGCT CCAAGCGCAA CGCAGGTAAG CGCCGTAGCA
ACGCCAGCAT CCGACACACC GGCGGCAACC ACCGAGGCAG CCGGACTGGA GCGAGGACGC
ACGCCGGAAG GATACCACTA TTTGGGGAAC GCCGACGCGC CGGTGACCAT TCTGGAGTTC
TCGGATTTTC TCTGCACTGC ATGCGCCTTT CATGTGGAAG AGACGGAACC GGCAATTATC
GACGCCTATG TTGCAACCGG AAAGGCGCGC ATTGTCTATC GGCATCTCCT GCAACTCGGC
GAGGAATCGC TGCGTGCAGC GGAAGCGGCG GAATGCGCAG GCGACCAGGG CAAATTCTGG
GAAATGCGCG ACGCCATCTA CCGCAACCAG GCAGCACTCT ACACCACCGG CGATGTTGGC
GCAGCGCTGA CATACCTGGC GCAAACAATC GATCTGGATA TGAATGAGTA TAACGTCTGT
GTGCAATCGC GCAAACACCG CGCGCGCATC GAAGCCGATT TTCGCGCCGC GCAGGACGCT
GGCATCCGTT CGCGTCCGGT GTTCGATATT GGCGGAACAC GACTGGTGGG CGCGCGACCG
TTCGAGGATT TCCAGGCGAT TCTTGATCAG CAGTAG
 
Protein sequence
MLSTKGIHRV IKQHQVLPLA IILPIIIAAC GGTPSAAPTP PQSAPIVSTA PSATQVSAVA 
TPASDTPAAT TEAAGLERGR TPEGYHYLGN ADAPVTILEF SDFLCTACAF HVEETEPAII
DAYVATGKAR IVYRHLLQLG EESLRAAEAA ECAGDQGKFW EMRDAIYRNQ AALYTTGDVG
AALTYLAQTI DLDMNEYNVC VQSRKHRARI EADFRAAQDA GIRSRPVFDI GGTRLVGARP
FEDFQAILDQ Q