| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1626 |
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| Symbol | |
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| ID | 5539102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2099645 |
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| End bp | 2100949 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893763 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001431736 |
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| Protein GI | 156741607 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.879586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTC TGTTTATCTC CGCATATGTT CCATCCGCCA TTCGGGTACG GCCATACGGC
TTCATTCGCG CACTGGCAAG GCGCGGTCAT CACATCACGC TGGTGTGCGG CGCCAATGCC
GATGACAGAC CGGCGCTCAG CGCGCTGCGT GAGGTATGCG CGCGGATCGT GACGGTTCAC
ATGGGCAAAG CCGAAATGCT CTGGAATGCA CTGCGCGCAC TACCCGGCGA CCTGCCGCTT
CAGGCGGCGC TCAGTTTCGG TCAACGCATG CTGGAAGCGG TGCGCACTGA AGATCGCAGC
AACCGGTACG ACATTGCCCA CATTGAGCAT ATGCGGGCAT CAGCACTGGG GTATGCGCTT
CTGCGCACAC CCGCCGTGCT CGACTCGGTG GACAGCATCA GTCTCCTGTT CGAGCGCGCG
CTTCGTGGCA GCCCATCACT CAAGAGCCGC ATGCTCGCAC TGATCGATCT GGCGCGCACT
CGCGCTTATG AGGCGCGATA CACCCGCCAT TTCGAGCAGG TTATCGTGTC ATCGCCGGAG
GATGCCTGGG CATTGCGCAC TCTCCGCCGA CACCTGCGCC CACACCCTCA ACCCGAACCG
CAGCGCTGGT GCGACAGCGC CACCAACCAT AACGTCCATG ATGCCATCAC GGTCGTGCCC
AACGGCGTCG ATCTGGACTA TTTCGCTCCC CAACCGATTG CGCGCGAGAG CGCAACAATC
GTCTTCAGCG GCAAGATGAG TTACCACGCC AATGAAGCCG CCGCGCTCCA CCTGGTGCGC
GACATTATGC CACTGGTCTG GGAGCGCCGC CCCGAAATAC GTGTGGTGAT CGCCGGAAGC
GCGCCACCGC CATCGGTGCG GGCGCTGGCA ACCGACCGAC GCGTGACCGT GACCGGCTAC
CTGGACGATC TGCGTCCGGC GATTGCCGGC GCAACGCTGG CTGTCGCCCC GCTCCGCTAC
GGCGTTGGCA TTCAAAACAA AGTGCTCGAA GCCATGGCAA TGGCAACGCC GGTCGTTGCC
GCGCGGCATG CAGCGCGCGC GCTGCATGCC GTAGAAGGAC GCGACCTGCT GCTGGCAGAA
CATCCGCGCG AGTACGCCGA CGCCATCTTT CGCCTGATGG AAGACCCGCA GCGCGCCGCT
GCCATTGGCG CGTCTGGAAG GCGATATGTC GAACAGCACC ACACCTGGGA CGCCGCAGCC
GGGCGATTGG AGACCGTCTA CAGCACCGCC ATTGAACAGT TCAACGATGT GACAAGGCTC
AGCCAGACGG CAGATGAGCG CGTTGCTCAC CCGATAGGAA GATAA
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| Protein sequence | MNILFISAYV PSAIRVRPYG FIRALARRGH HITLVCGANA DDRPALSALR EVCARIVTVH
MGKAEMLWNA LRALPGDLPL QAALSFGQRM LEAVRTEDRS NRYDIAHIEH MRASALGYAL
LRTPAVLDSV DSISLLFERA LRGSPSLKSR MLALIDLART RAYEARYTRH FEQVIVSSPE
DAWALRTLRR HLRPHPQPEP QRWCDSATNH NVHDAITVVP NGVDLDYFAP QPIARESATI
VFSGKMSYHA NEAAALHLVR DIMPLVWERR PEIRVVIAGS APPPSVRALA TDRRVTVTGY
LDDLRPAIAG ATLAVAPLRY GVGIQNKVLE AMAMATPVVA ARHAARALHA VEGRDLLLAE
HPREYADAIF RLMEDPQRAA AIGASGRRYV EQHHTWDAAA GRLETVYSTA IEQFNDVTRL
SQTADERVAH PIGR
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