Gene Rcas_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1610 
Symbol 
ID5539086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2081493 
End bp2082197 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content65% 
IMG OID640893747 
Producthypothetical protein 
Protein accessionYP_001431720 
Protein GI156741591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGACT ATCTGGCCGA ACTGGTGCGC GCGGCGCCTA CCTTGTCGGA AGGGCGCAAC 
CGCGCCCGTG AGTATCTCCA GGCGTGCATC CTGGGAGCGC TGCAGCGCGC GGGCGCGATG
ATTCCGCTGG CCTTTCACGG CGGCACCGCC CTGCGTTTTC TCTACGCCAG CGCCCGCTAT
TCCGAAGACC TGGATTTTGC CCTGGAGCAG GAGCGAGAGC ACTACGATTT GCGCGCCTAT
TTGCGGTCCG TGCAGAGCGC ATTGGCCGTC GAAGGCTATG CCGTCGAGTT CAAAGTCAAC
GATCGCAAAA CGGTGCATAG CGCCTTTGTG CGCTTCCCCG GCCTGCTTTA CGAACTGGGA
CTGTCGCCGC AGCGGGGCGA GGTCCTGGCG GTCAAGATCG AGGTGGACAC GGCCCCGCCG
ACCGGCGCCG GACTGGAGAC CACCCTCATT CGCCGACACA TTCCCCTGCG CTTGCAGCAC
CACGACCGGG CCTCGCTGCT GGCGGGCAAG ATCCATGCCA TCCTGCAGCG GCCCTTTCTC
AAGGGGCGTG ACCTGTATGA CCTGCTGTGG TATCTCAGCG ATCCCGCCTG GGCGCAGTCC
CACGTGGACG AAATCCTGCG CGACCTGGAG CGCGGCTCGC TGGACGGCAC GCTCGACCCG
TTCGGCGTGT ACCTCACCTG CTACCGCGTG CTGCGGGCCC AGTAA
 
Protein sequence
MKDYLAELVR AAPTLSEGRN RAREYLQACI LGALQRAGAM IPLAFHGGTA LRFLYASARY 
SEDLDFALEQ EREHYDLRAY LRSVQSALAV EGYAVEFKVN DRKTVHSAFV RFPGLLYELG
LSPQRGEVLA VKIEVDTAPP TGAGLETTLI RRHIPLRLQH HDRASLLAGK IHAILQRPFL
KGRDLYDLLW YLSDPAWAQS HVDEILRDLE RGSLDGTLDP FGVYLTCYRV LRAQ