Gene Rcas_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1505 
Symbol 
ID5538980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand- 
Start bp1921433 
End bp1921984 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content66% 
IMG OID640893643 
Producthypothetical protein 
Protein accessionYP_001431617 
Protein GI156741488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.233696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.576417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGC GCACGTGGAT ATGGTTCATT GGAGCGCTGG CAGTGACAGC GCTGGTCTTC 
ATCGCCCCCA ACGTCAACGC CCAGCAGGCG CCCGGCGCAT GCCCGTTTGG CGGAGTCTGT 
CCCACGGGCA CGCCACTGAT GCTGCGATCA GGCGGCGGCA CGCCAATGCA GGGACGAGAC 
GGCGGGTTGA TCGGCGTCGC CGCCGACACG CTGGGAATGA CGCGCCAGGC GCTGCTGAGC 
GAACTATACG GCGGCAAGAC GATTGCCGAC GTGGCGCTGG CGCAGGGGGT TGATCCACTG 
ACGATCGTCG ATGCCTTCGT GTCGCCACAG TTCGCCCGAA TCGACGCGCT GGTTGCGCGC 
GGCGTTATCA CCCAAAAACA GGCGGACGAC GCCAGGGAGA GCATGCGCAC CCATATCACC 
GTCCTGGTCA GTTCACCAAT CGAATCGTGG GTGCGGCAGG CGCACGATCC GCTCATCGGG 
CAACGCCCCA GTACCGCCGG GCAGGGTCCG GCCACACAAT CCGGCGGGCG CGGTCCTCGA 
TGGCAGCGCT GA
 
Protein sequence
MISRTWIWFI GALAVTALVF IAPNVNAQQA PGACPFGGVC PTGTPLMLRS GGGTPMQGRD 
GGLIGVAADT LGMTRQALLS ELYGGKTIAD VALAQGVDPL TIVDAFVSPQ FARIDALVAR 
GVITQKQADD ARESMRTHIT VLVSSPIESW VRQAHDPLIG QRPSTAGQGP ATQSGGRGPR 
WQR