Gene Rcas_1471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1471 
Symbol 
ID5538945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1879750 
End bp1880091 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content63% 
IMG OID640893609 
Producthypothetical protein 
Protein accessionYP_001431584 
Protein GI156741455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.654544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAAGTC CTATACTGCT CCCCTGGACA GTCAGACCAC CACAGCGCTG GACGGTGAAG 
CGCCGGGTCG CTCTGGTATT GGCGATCCTG CGCGGCGAGA CGATTGCGTC CGAGTCCGTC
CGCCGCCACG GACTGACCGT CGCCGAGATT GAGCGGTGGA AAGAGCGCTT CCTCGGTGGC
GCCGAGAACG CCCTGCGCAG CCGACCGCTC GACGATGAGG ACCTCAAAGA CCAGAAGATC
AAGCGTCAGC AGCGCAAGGT CGGCGAGTTG GTGATGGACA TCGACATCCT CAAGGAGTCC
AGCAAGACAA ACCCTTCTCA GCGGCGGATG CGCGACGAGT GA
 
Protein sequence
MQSPILLPWT VRPPQRWTVK RRVALVLAIL RGETIASESV RRHGLTVAEI ERWKERFLGG 
AENALRSRPL DDEDLKDQKI KRQQRKVGEL VMDIDILKES SKTNPSQRRM RDE