| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1368 |
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| Symbol | |
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| ID | 5538840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1749542 |
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| End bp | 1750969 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893505 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_001431482 |
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| Protein GI | 156741353 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCGA CCCGTCAGAT TCTGATCGAT CCGGTTACCC GGATTGAAGG ACATGCCAAG
ATCAGCATCC ATCTGGATGA CAACGGCGAG GTGCGGGAAG CACGCTTCCA TGTCACCGAG
TTTCGCGGTT TCGAGCGTTT TTGCGAAGGG CGCCCGTTTT GGGAGATGCC CGGCATTACA
GCACGCATTT GCGGAATATG CCCGGTGAGC CATTTGCTGG CATCCGCGAA AGCAGGTGAT
GCGCTGCTCT CGGTCACTAT TCCGCCAGCC GCCGAGAAAC TACGTCGGCT GATGAACCTG
GGACAAATGG TACAGTCGCA TGCGCTCAGT TTTTTCCACC TCAGCGCTCC CGATCTGCTG
CTCGGCTTCG ACAGCGATCC GGCACAACGC AATGTTTTCG GACTGATGGC CGCCGATCCG
ACCCTGGCAC GCGCGGGTAT CCGACTGCGG CAGTTCGGGC AGGACATTAT CGCCATGCTT
GGCGGCAGTA AGATTCATCC GGCGTGGGCT GTCCCCGGTG GCGTCCGTTC GGCGCCAACC
GCTGTGCAAC GCGCGGACAT CGCTCAACGT TTGCCGGAAG CGCGGGCTAC TGTGCTTGAT
GCGCTCCGTC GCTTCAAAGC CCTGCTCGAT ACTCATCACG CCGAGGTGGC GACCTTTGGC
AATTTCCCGT CGCTCTTCCT GGGATTGGTC GGACCTCATG GCGAGTGGGA GCATTACGAC
GGACGTTTGC GTGTAGTGGA CGCGGGCGGA GCGATTATTG CCGATCAGGT CGAGCCAAGC
CGCTACCGCG ACATTATTGC CGAGGCGGTC GAACCGTGGT CGTATTTGAA GATGCCCTAC
TATCGGGCGC GTGGGTATCC CGCCGGGATG TATCGCGTCG GTCCGCTGGC GCGCCTGAAC
ATCTGCACCC GCATTGGCAC GCTGCTGGCA GATGCCGAAC TTGGAGAGAT GCGGCAGCGT
GCCGGTGGCA TTGCTACTTC ATCGTTCTAC TATCACTACG CGCGCCTGGT CGAAATCCTG
GCGGCGCTGG AGCGCATTTC GCTCTTACTC GACGACCCGG ATCTCGACTC GCTGCGATTG
CGCGCCGAAG CAGGTCTTAA TCAATTCGAG GGGATTGGGG TGAGTGAAGC GCCGCGCGGA
ACTCTGTTCC ACCACTATAC CGTTGATGCG CATGGTCTGA TCCAGAGTGT GAACCTGATT
ATCGCAACAG GGCACAACAA TCTGGCGATG AATCGGACGA TCGCCCAGAT TGCGCGGCAC
TATGTCAAAG GCGACCAGAT CAGCGAAGGC GCCTTGAACC GGGTAGAGGC AGGCATTCGC
GCCTACGACC CGTGCCTGAG TTGCTCGACG CATGCTGCCG GAACGATGCC GCTGGTAGTG
ACATTGATTG CCGCAGACGG CACGGTGCTC GATGAAGTGC GACGGTGA
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| Protein sequence | MPATRQILID PVTRIEGHAK ISIHLDDNGE VREARFHVTE FRGFERFCEG RPFWEMPGIT
ARICGICPVS HLLASAKAGD ALLSVTIPPA AEKLRRLMNL GQMVQSHALS FFHLSAPDLL
LGFDSDPAQR NVFGLMAADP TLARAGIRLR QFGQDIIAML GGSKIHPAWA VPGGVRSAPT
AVQRADIAQR LPEARATVLD ALRRFKALLD THHAEVATFG NFPSLFLGLV GPHGEWEHYD
GRLRVVDAGG AIIADQVEPS RYRDIIAEAV EPWSYLKMPY YRARGYPAGM YRVGPLARLN
ICTRIGTLLA DAELGEMRQR AGGIATSSFY YHYARLVEIL AALERISLLL DDPDLDSLRL
RAEAGLNQFE GIGVSEAPRG TLFHHYTVDA HGLIQSVNLI IATGHNNLAM NRTIAQIARH
YVKGDQISEG ALNRVEAGIR AYDPCLSCST HAAGTMPLVV TLIAADGTVL DEVRR
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