Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1343 |
Symbol | |
ID | 5538815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1720867 |
End bp | 1721508 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640893480 |
Product | hypothetical protein |
Protein accession | YP_001431457 |
Protein GI | 156741328 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.747417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTGT ATCTATCATC AGGACGTCGT CTGCCGACTC GCCGCATACC AGGCTATGAG ACATTGGTTG CTCTGATTCT GGTCCTTGCC ATTATTACGA TACCCTTCCT CGCTGCGCCC TGGCTGATTG TTGACGACGC CGTTGATACG GCGGATGCGA TTATTGTTCT CGGCGGCGAG GCATATCCGC CAAACCGCAC CATCCACGCA CTGGCGCTCT ACCATCAGCA TCGCGCGCCG GTGGTGGTCT TCACCGGCGG TGCGCCACCC GGCAGACCGC CGGAAACCTC ATCGGCGCAG GTGGCACGCC GGCTTGCACT GGCGCGCGGA TTGCCGCCGG ACGTTGCGCT CCTGGCGGAT GGCGCACAGA GCACCTACGA TGAAGCAGTG CTGGTGCGCG AACTGGTCGC TGCTCACGGC TGGCGCTCGC TCATGATCGT CACCGATCCG TACCATACCC GACGCGCGGT TCGCACCTTT CGCACGCTCA TTCCCAACGC TCACGTGACG GCGAGCGCTG CTCCGTTTCT CTCTCCCTGC GCCGATCCCT GGCGGTGCGG CGCACGCATC TGGCGCTACG CCGCCAGCGA ACTGGTGAAA ATGGGATTCT ATCGTCTGTA CTACGGCGTG CCGCTGTCCT GA
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Protein sequence | MSLYLSSGRR LPTRRIPGYE TLVALILVLA IITIPFLAAP WLIVDDAVDT ADAIIVLGGE AYPPNRTIHA LALYHQHRAP VVVFTGGAPP GRPPETSSAQ VARRLALARG LPPDVALLAD GAQSTYDEAV LVRELVAAHG WRSLMIVTDP YHTRRAVRTF RTLIPNAHVT ASAAPFLSPC ADPWRCGARI WRYAASELVK MGFYRLYYGV PLS
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