| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1282 |
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| Symbol | |
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| ID | 5538754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1654958 |
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| End bp | 1655797 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893420 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001431397 |
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| Protein GI | 156741268 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.181743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGC CTGTGCACGC CAGGCTCCAG GAGAATGCTA TGAGCCAACT GGGCGAGCGG
CTGCGCGCAG CTCGCGAAAG CCAGGGCATC AGCCTCTCAC AGGCTGCTGC TGAAACCCGC
ATTCTGCAGC GGTACCTCGT GGCGCTCGAG GACGGCGATT ATCAGAATCT TCCCGGCGAT
GTGTACGTTC GTGGCTTTAT TCGCAACTAT GCCGCGTTCC TCGGCTTATC GGCAGACGAG
TTAATCGATC TGTACCGCTA TGAACGCGGA CGCACCGACC CGATCCGCAT CGTTCCGGCA
ACGTCGAATC CTCGTGTGCG CGGGTGTATT GCGCCGAGTC TGGTCGGCGT CTTTTTTGTG
GTGCTGGCGC TGGTTGGGGT GACATATCTG GTGTTGAGCG CCACGAATCG GATTGGTGAA
AATGCGCAAC TCGCCACCAT TCCAACGGCG ACGATACCTC CTGCGCCAAG CCCGCTGCCA
ACGGCGTTGC CAGAAGCGAC GCCCGTGCCG ATCATTATTC CGGCAACAGC GACGGTTGCT
GTGGCTGGGG GAGTGATCGA ACCATCACCA ACGTCGACAC AGGAGCCAGA GGCGCCGATT
GTGCTCGAGG TGCGGATCGA TCCGGGTGAT AATCCTGGCT CGTGGCTGGA GATCAAAACC
GATGGTGAAT CGGTCTTTCG GCGGGTGCTG GCGCCGGGTC GTTCGGTGCG CTTTACCGCC
CGCCGCTCAG TGTCGGTGCG TGCCGGCAAT GCGGCGGTTG TGACGGTCGT GATTAACGAT
CAGGAACGCC GCCTTGGCAC GCGCCCCGGC GAAGTGGTGA CCTTTGAGTG GCCGCCGTAA
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| Protein sequence | MNAPVHARLQ ENAMSQLGER LRAARESQGI SLSQAAAETR ILQRYLVALE DGDYQNLPGD
VYVRGFIRNY AAFLGLSADE LIDLYRYERG RTDPIRIVPA TSNPRVRGCI APSLVGVFFV
VLALVGVTYL VLSATNRIGE NAQLATIPTA TIPPAPSPLP TALPEATPVP IIIPATATVA
VAGGVIEPSP TSTQEPEAPI VLEVRIDPGD NPGSWLEIKT DGESVFRRVL APGRSVRFTA
RRSVSVRAGN AAVVTVVIND QERRLGTRPG EVVTFEWPP
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