| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1153 |
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| Symbol | |
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| ID | 5538619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1491857 |
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| End bp | 1493386 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893285 |
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| Product | SH3 type 3 domain-containing protein |
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| Protein accession | YP_001431268 |
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| Protein GI | 156741139 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3103] SH3 domain protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAG AGATCGTCAT TGCTTTGCTG GTCGGTGCCA TCTTGATTGT CGCCATTGCA
CTGATTCTGG CGCGGCGGCG ACGCGCTGCC CGGCAGGATG AGTTGCCGCT GCCTGATATT
GGCGGGATCG GTGGGACGAT CGATTACACA TCGCTTCCCG AAGAGGAGCC GCGCACCCTG
GGAGAGCGCT TCCGCGCAGC GCCGCCGGCG GTCAAGGCGC TGATCATCCT TGCACCGGTT
GTCCTCATTG GGGTGATCGT CGTTCTGGCG TTGACGTTCA CCCCGGTGGA CTCTGGCACG
CCATCGACTC CTCCGCCCCC GCCGCCGCGC CTTGCCATCG AACGCGCTGA GGTCGTCGGC
AGGGGCAAAA TCGTTGTGGT CGTCAAAACG GAAAATCTGC CGTCCGGCGC AACGGTGACG
GCGATCCTGC GCGAGGGCGA TCAGGAGTTC TCGTGGTTCA ACCCCGAAAC GGCGCTGGCG
CAGCCCGATC CGCTCAGCGG TGAGGCGCAG GTGGTGCTCG ACCGTCGCTC CGATGCGCCA
ACGCCACGTC AGGGTGAGAC GTACACGGTG ATTGCCATTG CGCGCGGGGC CAACGGCGAA
ATCGCGCGAT CCGATCCCGC GCCGCTCGAT GTCTTGCAGC CGTTCTTCAA CGATTTTTAT
GTTCTGGCTG TCGAACCGAC GCCGGCGCCA GCAGCAACGC CCACCGCGAC GCTTTCGCCC
GTAACGCCGG AATCGGCGCC AACAGTTGTT GCAACCCAGG AGTTGACCGG CACAGCGACG
ATTGCCGGCA ACATCCGGCG CGCACCCAAT CGTGAAGCGG ACGTGGTAGG GCGATTGTCG
CTCGGTGAGG TTGTTACTCT CTCCGAACGC AGTATCGATG GCGAATGGTA TCGCATCTCT
ACGTCGGCTG GTCTCAGTGG ATGGGTCAGT CGCACGCTGC TGATCGTCGA TCAGGACCTG
GCGGCACAAC TGCCGGTCGC CACGCCTGAC AATCTGCCAA CAGCCGCCGT GTTCAATGGC
GGGAATGTGC GCACCAGTCC AAACCTGCGC GGTCTGGTCA TCGATCAGGT CAATGCGGGT
GAAAGCGTGA CTCTGCTGGC GCGCAACACC GACAGCACAT GGGTCAAGAT TATCAATGAG
CGCCAGATTA CAGGATGGGT GAGCCGCACC CTGCTGACCA TCACGCCCAA CGACTTGCGC
AGTCTGCCGG TCTCGAACGA AACTGTGCCA ACGCCACTGC CCGCGACGGC GGCGGCGCTG
CCGCCGCCGC CGACCCCGAA TGCGACCGTG CCGCCGATGA CCGGGCTGAC TGCCATTGTG
TTCAATGGCG GGAATGTGCG CGCAGCGCCC AACCTTCAGG CGCAGGTGCT CGATCAGGTC
AATGCCCGTG AAACCGTGCA ACTGCTCTCC AAGACGCCCG ACGGCAACTG GTACCGGATC
ACCAATATTC GCGGCGTGAC CGGTTGGGTC AATCGCACGC TCCTGACCGT CGACCCCGAT
GTGGCGCGCC GTGTGCCGGT GGGGCAGTGA
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| Protein sequence | MSQEIVIALL VGAILIVAIA LILARRRRAA RQDELPLPDI GGIGGTIDYT SLPEEEPRTL
GERFRAAPPA VKALIILAPV VLIGVIVVLA LTFTPVDSGT PSTPPPPPPR LAIERAEVVG
RGKIVVVVKT ENLPSGATVT AILREGDQEF SWFNPETALA QPDPLSGEAQ VVLDRRSDAP
TPRQGETYTV IAIARGANGE IARSDPAPLD VLQPFFNDFY VLAVEPTPAP AATPTATLSP
VTPESAPTVV ATQELTGTAT IAGNIRRAPN READVVGRLS LGEVVTLSER SIDGEWYRIS
TSAGLSGWVS RTLLIVDQDL AAQLPVATPD NLPTAAVFNG GNVRTSPNLR GLVIDQVNAG
ESVTLLARNT DSTWVKIINE RQITGWVSRT LLTITPNDLR SLPVSNETVP TPLPATAAAL
PPPPTPNATV PPMTGLTAIV FNGGNVRAAP NLQAQVLDQV NARETVQLLS KTPDGNWYRI
TNIRGVTGWV NRTLLTVDPD VARRVPVGQ
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