Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1105 |
Symbol | |
ID | 5538571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1431473 |
End bp | 1431961 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640893239 |
Product | DNA polymerase beta subunit |
Protein accession | YP_001431222 |
Protein GI | 156741093 |
COG category | [R] General function prediction only |
COG ID | [COG1708] Predicted nucleotidyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00137564 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGATA TCGATCTCCA GACCTTTCAG CAACGTGTTG CAGCGATTGC AGCCACGCAC CTACAGGTGC AGCTGGTGTA TCTCTTCGGA TCGCGCGCTG GTGGCGAGTT TGGTCCGATG AGTGACATTG ATCTGGCGGC AGTGCTGGAT CGGGAGGCGT CTATTCCGCA CCTGCGCGAC GAACTGGCGT ATCGCTTCGC AGAGGCGCTC AATGACGGAT CGGTTGATCT CATCATCCTG AACCAGGCGC CAATTGAGCT GGCATACGCT GTCATTGCCG AGGGTAGAGC GCTCTACCAG CGTTCCCTGG TTGAACGCAT CGAGTATGAG GCGGACGTGA TGAGCCGTTA CGGCGACTAT CTGCCCGTGC TGCGGGCGCA ACGCTGGGAC ATTGTGCATG GATCTGGCGA TGAGCGTCGA GTTCAGCGGT ATCGAGAGGC GTTTGGACGA ACTCAGCGAG CGCCTGGCGC GTCTGACCCC GTTGCGTGA
|
Protein sequence | MFDIDLQTFQ QRVAAIAATH LQVQLVYLFG SRAGGEFGPM SDIDLAAVLD REASIPHLRD ELAYRFAEAL NDGSVDLIIL NQAPIELAYA VIAEGRALYQ RSLVERIEYE ADVMSRYGDY LPVLRAQRWD IVHGSGDERR VQRYREAFGR TQRAPGASDP VA
|
| |