Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0990 |
Symbol | |
ID | 5538456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1292873 |
End bp | 1293547 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640893134 |
Product | peptidase M50 |
Protein accession | YP_001431117 |
Protein GI | 156740988 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCGA CGCCTGATGA GGGCATTTTT GCGGGGCGAA GCAACGACAC CGTTGAGTTA TTCAAAGCCT GGGCTGGCAC TACCATCGCC TACGCCGTCT TTCAAACCGG CGCGACAAAC CTGGCAAGCA GCCGGTTTTT GACGAATCTC TTCATTGCAG CCGTGGTGTG TGGTTTGGGG TTCGTGCTCC ACGAACTGGC GCACCGTATC GTTGCGCGGC GATTCGGCGC ACAGGCGCAC TTTGTTGCAA ATGTGCAGAT GCTGGCGATC TCGATTGTCG TCGCGTTCCT CCCCCTTGGT CTCTTCTTCG CTGCTCCCGG CGCCGTCTGG CATCGCGGCT ACCTGACGCC GCGCCAGAGC GGGTTGATCG CCCTGGCGGG ACCGGCGACC AACATGGCGC TTGCAGGAGT GTTTCTCGTT GCGGCGCCGG TTGCGTTCCT CGCCGGTCTG CGCGATACCT GGATCGTGCA ACTGTTCTAT ACCGGCGTTG CCCTGAATGC CTGGCTTGGG TTGTTCAATA TGATCCCCGC CGGACCATTC GATGGCGCCA AAGTGCTTGC CTGGAACTCC GTTGTGTTTG GCGTTACGGT AGCCATTGGC ATCCTGCTGG CATTTGTGCT TCCTGGCAAT CTCCTGAATA TCTGGCTCTT TGTCCTGAGG CTGTTTGGCG GTTAG
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Protein sequence | MFSTPDEGIF AGRSNDTVEL FKAWAGTTIA YAVFQTGATN LASSRFLTNL FIAAVVCGLG FVLHELAHRI VARRFGAQAH FVANVQMLAI SIVVAFLPLG LFFAAPGAVW HRGYLTPRQS GLIALAGPAT NMALAGVFLV AAPVAFLAGL RDTWIVQLFY TGVALNAWLG LFNMIPAGPF DGAKVLAWNS VVFGVTVAIG ILLAFVLPGN LLNIWLFVLR LFGG
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