| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0982 |
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| Symbol | |
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| ID | 5538448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1287472 |
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| End bp | 1288518 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893129 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431112 |
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| Protein GI | 156740983 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | [TIGR00748] hydroxymethylglutaryl-CoA synthase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGC CTGAACGACC TGTGGGCGTT GTCGGGTATG GCGCCTACAT CCCGCGCTTT
CGCATCGCGG CGCGTGAAAT CGCCCGCATT TGGGATGGCG CGGGCGGGAC GCCGGTCGAC
TCGAAGAGCG TACCCGGTCC CGACGAAGAT ACTATCACCA TGTCGATTGA AGCCGCGCGC
AACGCGCTGG CGCGAGCGCG CATCGCACCC GACCGCCTCT CGGCGGTGTG GGTTGGCAGC
GAGAGCCATC CCTACTCGGT TAAACCGTCT GGAACGCTGG TTGCCGAGGC GCTCGGCGCG
ACGCCGTGGG TCAGCACGGC AGACTGGGAG TTCGCCTGCA AAGCCGGTTC TGAGGCGCTG
ACTGCTGCGA TGGGCATGGT CGGCAGCGGC ATGGCGCAGT ATGTGCTGGC AATCGGCGCC
GATACCGCGC AGGGTCGCCC TGGCGATGCG CTGGAATACA CCGCCGCTGC CGGAGCAGCG
GCGCTGCTGA TCGGTCCGGC GGCGGATGCG GTTGCAATTA TTGAAGGGAC GACCTCGTAT
GTAACCGACA CCCCCGACTT TTTTCGCCGC GCCGATACGG CGTATCCGGT GCACGGGCAC
CGTTTCACCG GCGAGCCGGC TTACTTTGGC ACATCGCGCC ACGCCGCCGA ACAGTTGCTG
CGCGATCTGG GAGCGAAGCC ATCGGATTTC ACCTATGCTG TGTTCCACCA ACCGAACACG
CGCTTCCCGC AGACGGTCGC CCGCCAACTC GGGTTCACGC CGCAGCAAAT CGCGCCAGGG
CTGCTGTCGC CAAAGATCGG CAACGCCTAC TCGGCGGCGG CGCTGCTTGG ATTGTGCGCC
ATTCTCGATG TGGCAAAGCC GGGTGATACG ATCTTTGTAA CAACCTACGG TTCTGGCGCA
GGGTCCGACG CTTATGCGCT GCGGGTAACC GATGCGCTGC CTCAACGCCG TGAGCGGGCG
CCGCTGACGG CGGCGTACCT GGCGCGCGAA ACATTCGTCG ATTATGCCGT GTACGCCAGG
TGGCGCGGCA AACTGGTGAT GGAGTAG
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| Protein sequence | MMKPERPVGV VGYGAYIPRF RIAAREIARI WDGAGGTPVD SKSVPGPDED TITMSIEAAR
NALARARIAP DRLSAVWVGS ESHPYSVKPS GTLVAEALGA TPWVSTADWE FACKAGSEAL
TAAMGMVGSG MAQYVLAIGA DTAQGRPGDA LEYTAAAGAA ALLIGPAADA VAIIEGTTSY
VTDTPDFFRR ADTAYPVHGH RFTGEPAYFG TSRHAAEQLL RDLGAKPSDF TYAVFHQPNT
RFPQTVARQL GFTPQQIAPG LLSPKIGNAY SAAALLGLCA ILDVAKPGDT IFVTTYGSGA
GSDAYALRVT DALPQRRERA PLTAAYLARE TFVDYAVYAR WRGKLVME
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