| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0885 |
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| Symbol | asnC |
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| ID | 5538351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1157827 |
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| End bp | 1159149 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893036 |
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| Product | asparaginyl-tRNA synthetase |
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| Protein accession | YP_001431019 |
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| Protein GI | 156740890 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00274664 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCACTCC TTCCAACTGC CACTATCAGT GACATCGCGC GCCACAATGG TCGGGTTGTC
ACCCTTGCCG GATGGGTTGC CCATAAGACT GAGAAGGGCA AACTGGTCTT CATCCGGCTC
CGTGACGGGA GCGGCGTCAT GCAGTGTGTC GTGTTTCGCA AGAATGTCGC TGAGGAGACC
TTCATCGCTG CGCAGCGGCT GACCCTCGAA AGTTCCTGCC GTATCACCGG AACAGTCCGC
GCCGACGAGC GCGCCCCTGG CGGGTTCGAA CTCGATGTCA ACGGTATCGA GATCATCCAG
ATTGCGCCGG AGTATCCGAT TCAGCCTAAG GAGCATGGCG TTGAGTTCCT GATGGAACAC
CGGCATCTCT GGGTGCGTTC CTCGAAGCAG CACGCGCTGC TGCGCATTCG CGCCGAGATC
ATCGCTGCGG CGCAGGAATG GCTCAACGCT CAGGGGTTTG TGCGCTTCGA TACGCCCATT
CTCACACCGT GCGCCGCAGA GGGCACCACC AACCTCTTCG CTACGCCCTA CTTCGACCTC
GGAACGGCGT ACCTTGGGCA GACCGGTCAA CTCTATGTCG AAGCCGGCAT GATGAGTTTC
GGCAAGGTCT ACTGTTTTGG TCCGACCTTC CGCGCCGAGA AGTCGAAAAC GCGCCGGCAT
CTGACCGAGT TCTGGATGAT CGAGCCGGAA GTGGCATTCG CCCTGCACGA CGACAACCTG
GCGCTGCAAG AGCAGTTCGT CAGCGCCATC GTTCAGCGTG TGCTTGAGCG CCGCGCCGAT
GATCTTGCCA CCCTCGAACG CGATACGAAG CCGCTCGAGC GGTGCGTGCC GCCGTTCCCG
CGCATTACCT ACGACGAAGC GCTGCGTCTC ATCGCTGAGC GATATGCGGA AGTCGAAGGA
TGCACGCCGC TGGAATGGGG CGAAGACCTT GGCGCGCCGC ACGAAACGCT GATTGCGTCC
ATGTTCGACC GTCCGGTTTT TGTCGAGCGA TTCCCTAGCG CCATTAAGGC CTTTTATATG
GAACCCGATC CGAATCGCCC CGAAGTTGCG CTGTGCGCCG ATCTGCTGGC GCCGGAAGGG
TATGGCGAGA TCATTGGCGG CTCGCAGCGC ATTCATGACG CCGCATTGCT TGAGCGGCGC
ATTCGAGAAT ATGGGTTGAA TGTAGACGAT TATCGGTGGT ACATCGATCT GCGTCGCTAT
GGCAGCGTGC CGCACAGCGG GTTCGGTATG GGCATCGAAC GCGCAACTGC CTGGATTGGC
GGTACGCACC ATATTCGGGA AACAATCCCG TTTCCACGTA TGCTGTATCG CATGTATCCG
TAA
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| Protein sequence | MSLLPTATIS DIARHNGRVV TLAGWVAHKT EKGKLVFIRL RDGSGVMQCV VFRKNVAEET
FIAAQRLTLE SSCRITGTVR ADERAPGGFE LDVNGIEIIQ IAPEYPIQPK EHGVEFLMEH
RHLWVRSSKQ HALLRIRAEI IAAAQEWLNA QGFVRFDTPI LTPCAAEGTT NLFATPYFDL
GTAYLGQTGQ LYVEAGMMSF GKVYCFGPTF RAEKSKTRRH LTEFWMIEPE VAFALHDDNL
ALQEQFVSAI VQRVLERRAD DLATLERDTK PLERCVPPFP RITYDEALRL IAERYAEVEG
CTPLEWGEDL GAPHETLIAS MFDRPVFVER FPSAIKAFYM EPDPNRPEVA LCADLLAPEG
YGEIIGGSQR IHDAALLERR IREYGLNVDD YRWYIDLRRY GSVPHSGFGM GIERATAWIG
GTHHIRETIP FPRMLYRMYP
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