| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0879 |
|---|
| Symbol | |
|---|
| ID | 5538345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 1149889 |
|---|
| End bp | 1150290 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640893030 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001431013 |
|---|
| Protein GI | 156740884 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.374693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000252652 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC TGCTGCTGAA GGAAGAGGTC TTTGCGATCA TCGGCGCTGC AATAGGCGTG
CATCGGGAAC TGGGGTCGGG ATTCTTGGAA CCAGTCTACC AGGAAGCAAT GGAAATCGAA
CTATCGAGTC GTCATATTCC CTTCGAGGCG CGAAAGCTCT TGATCATCAA GTACAAGGGA
CACACTCTCC AGAAACAATA CGAAGCAGAC CTGATATGTT ATGGTCAGAT TATTGTCGAG
TTGAAAGCCC TGGATCATCT TTCAGGAAAG GAACAGGCGC AAATCCTGAA TTACTTGAAA
GCCACCGGGC TGCAGGTTGG CCTGCTGATC AATTTTGGGA GCCATGCACG TCTCGAATGG
AAACGCTTTG TCCTTTCGGG ACATATCCAC AAAGTGCACT AA
|
|---|
| Protein sequence | MTELLLKEEV FAIIGAAIGV HRELGSGFLE PVYQEAMEIE LSSRHIPFEA RKLLIIKYKG
HTLQKQYEAD LICYGQIIVE LKALDHLSGK EQAQILNYLK ATGLQVGLLI NFGSHARLEW
KRFVLSGHIH KVH
|
|---|
| |