Gene Rcas_0674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0674 
Symbol 
ID5538138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp884226 
End bp884588 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content56% 
IMG OID640892831 
Productresponse regulator receiver protein 
Protein accessionYP_001430816 
Protein GI156740687 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0682036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC TCATCGTTGA CGACAACCGC GACATCCTTG ATCTTGTGCA GCGTATCCTC 
ACGGCTGAAG GCCATAGCAT TATCATTGCT CGCAATGGCT TAGAGGCGCT TCAGCGTGAA
GCAGAGCACA GGCCGGATCT GATCGTACTC GACGTCAACC TGCCCTACCT GGACGGCTGG
GAGGTCTGCC GGCAGATCAA GGCACGGCGT TCAGTGCCGA TTATCATCCT GTCGGTGCGC
GCAGAAGCGG TAGATATGGA GCGCAGTCGT AATGCCGGCG CTGACGATCA TGTGCTCAAA
CCGTTTGAAA TCAACGATCT GATCGAACGG ATTGCGCGTC TTTCAGGAAC GTCGCCGGCA
TAA
 
Protein sequence
MRILIVDDNR DILDLVQRIL TAEGHSIIIA RNGLEALQRE AEHRPDLIVL DVNLPYLDGW 
EVCRQIKARR SVPIIILSVR AEAVDMERSR NAGADDHVLK PFEINDLIER IARLSGTSPA