| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0626 |
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| Symbol | |
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| ID | 5538089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 825732 |
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| End bp | 826733 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892784 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001430770 |
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| Protein GI | 156740641 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.464405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.107991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATGA CCCGACGTGA ACGACTCGCT GCGGCGATCC GAGGCGAACC GGTTGATCGC
CCACCTGTTG CGCTCTGGCG CCATTTTCCG GTAGATGATC AGGACCCCGA ACAACTGGCG
TTATCCGTGG CTGCGTTTCA GTCGCAGTAC GACTGGGATT TCGTCAAGTT CACACCATCG
AGCAGTTTTT GTGTCGAGAA TTGGGGATGC CGCGTCGTGT ACCGTGGGCA CTCCGAAGGA
ACCAGCGACT ACGTCGCGCG CCCGGTCAGC GTCCCTGCCG ACTGGCGGCG CATTACGCCG
CTCGACCCGC GCGCTGGCGC ACTTGGCGCG CATCTGGTAG CCGTCCGTCG TGCGCGCGCA
TTGATCGATC CCGACGTTCC CCTGCTGGCG ACAGTCTTCA GCCCGATCAG TCAGGCAAAG
AATCTGATCG GCGGAGGGAT GGACATTGTA CATCTCCGGC GTCATCGCTC CGATCTGCTG
GACGCGCTCG AAGCAATCAC AGAAACAACG ATACGCTTCG TCGAAGCCGT ACTCGAAACC
GGCGCCGACG GCATTTTCTA CGCAATGCAA CGATGTACAG CGGATGTCAT CAGCGAAGCC
GAATACCGCG AGGTCTGCCG TCCGCTTGAC ATGCGCATTC TCGAAGCGGC GCATGCAGCC
AGCGCAGCAC ATGGAAAACC GCCTTTCATT CTGCTCCACC TGCATGGTAT GCACTCCTAC
TTCGACATTG CAGCGGAATA TCCCGCGCAG GCGCTCAACT GGCACGACCG CGACACCGGA
CCCGACCTCG CTGAAGGCGC GCGCCGCTTT CCAGGCATGG TTGTTGGAGG TTTAAGCCAA
CGCGATATTG TCGAAGGTTC ACCCACGGCA GTGCAGTCGC TGGCGCGCCA GGCAATCGCA
GCGATGGGCG GACGGCGCAT GTGCCTTTCG ACCGGCTGTG TGATGCCGAC GACGGCGCCC
TGGGGGAACA TTCGCGCACT GCGAGATGTC GTGGGTCCAT GA
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| Protein sequence | MSMTRRERLA AAIRGEPVDR PPVALWRHFP VDDQDPEQLA LSVAAFQSQY DWDFVKFTPS
SSFCVENWGC RVVYRGHSEG TSDYVARPVS VPADWRRITP LDPRAGALGA HLVAVRRARA
LIDPDVPLLA TVFSPISQAK NLIGGGMDIV HLRRHRSDLL DALEAITETT IRFVEAVLET
GADGIFYAMQ RCTADVISEA EYREVCRPLD MRILEAAHAA SAAHGKPPFI LLHLHGMHSY
FDIAAEYPAQ ALNWHDRDTG PDLAEGARRF PGMVVGGLSQ RDIVEGSPTA VQSLARQAIA
AMGGRRMCLS TGCVMPTTAP WGNIRALRDV VGP
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