| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0625 |
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| Symbol | |
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| ID | 5538088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 824389 |
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| End bp | 825735 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892783 |
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| Product | virulence factor MVIN family protein |
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| Protein accession | YP_001430769 |
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| Protein GI | 156740640 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.289297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.111362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGC GTGAATTCAG CATTGCGGAA GGAACACTCC TGTTCACTAC CGCATACGTC
ATCTCAGCCG GATTGGGCAT TGTGCGCCAG GCGCTGTTCA ATGCCGGGTT TGGCGCAGGG
ATGGAAGCCA GCGCCTACTA TGCCGCCTTC CGATTGCCCG ACACCATCGC AAGCCTGATC
GGCGGCGGCG CACTGTCGAA TGCGATGATA CCGGCGCTAC TCGGCGCGCG CTACGAATCG
GGCGATGTCG CCGAACAGCG ACTGGTGAAC CTGACGGCCA CCACCCTGAC CGTCGCGGTC
TCGCTGGTCG TACTGGTCTG CATGATTTTC GCACCTTTCT TTGTGCGCTT TGTGCTTGCC
CCCGGCTTCG ATGCCGAAAC CGCCGCGCTG ACCATCGCGC TGACCCGCAT TATGCTCGCG
CAACTGGCGC TGGTCGTGCT GGCAAGCGTG GCGATTGCCG TGCTGAACGC GCGGAACCAG
TTTTTATTAA CGGCAATCTC GATAGTAACG CACAACGTCA CGATGATCGG CGGAATCCTG
GCGGCGCGTT TCATTCCCGG CGTCGGCATC TACGGTCCTG CGTTCGGCGT CGTTGGCGAT
GCGATCCTGC AACTGATCAT TCTATGCCCC GGACTGCGCG CCAACCGTTT TCGTGTGCGT
CCGGCGTGGG ATCTGCGCGA TGCACGACTG CGCCAACTGT TCCGGTTGCT GGCGCCAAAC
GGCTTATCAT CCGGGGTGAA CTATGCAGGC GGCATCGTCG ATACGGCATT CGCCTCGCTG
GCGCGGGAAG CGGGGGCGCT GCCAGCGCTC TTCAACGCCG GTTTGCTGAT GGGTGTGCCG
CTCCGGTTGA TCGGCGTTGC GCTGGCGCAA GCGGCATTTC CGCGTATTGC CGCCTATGCC
GCGCGCAACG ACCGGAAGCG CCTGCGTCGC ACCCTCCTTG CGGCGCTAGC AGGCAGCATG
ACCCTGGCAG TTGCGGCTGC GCTCACGCTG GCGCTCATCG GTCGCGCGCT CGTTCGCCTG
CTGTTCGAAC GTGGTCGTTT TGATGCCGCT GCCAGCGATC TGACGACGCT GCTGCTTGGG
GTGTATATCG CGGGGTTGCC GATGTATGTG GCAACGGAAG TGCTGACGCG CGGACTGATC
GCACTGCACG ACACCCAAAC GCCGCTGGTG ACGAACTGTG CGCAACTCGC GGGACGCGGC
GTGTTGATAT GGGTGTGGAT CGAGCCTTGG GGCGTGGTTG CAATTCCTGC GGCATTTGCG
ATCACCTCAG TGCTGGAAAC GGTGGCGCTG GGAGCGGCGC TGGCGTGGCG GATGCGTCGG
AGGCGAGAGG CAAGAGGCGA GAGGTAG
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| Protein sequence | MIRREFSIAE GTLLFTTAYV ISAGLGIVRQ ALFNAGFGAG MEASAYYAAF RLPDTIASLI
GGGALSNAMI PALLGARYES GDVAEQRLVN LTATTLTVAV SLVVLVCMIF APFFVRFVLA
PGFDAETAAL TIALTRIMLA QLALVVLASV AIAVLNARNQ FLLTAISIVT HNVTMIGGIL
AARFIPGVGI YGPAFGVVGD AILQLIILCP GLRANRFRVR PAWDLRDARL RQLFRLLAPN
GLSSGVNYAG GIVDTAFASL AREAGALPAL FNAGLLMGVP LRLIGVALAQ AAFPRIAAYA
ARNDRKRLRR TLLAALAGSM TLAVAAALTL ALIGRALVRL LFERGRFDAA ASDLTTLLLG
VYIAGLPMYV ATEVLTRGLI ALHDTQTPLV TNCAQLAGRG VLIWVWIEPW GVVAIPAAFA
ITSVLETVAL GAALAWRMRR RREARGER
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