| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0613 |
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| Symbol | |
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| ID | 5538076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 811647 |
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| End bp | 812636 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892773 |
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| Product | SCP-like extracellular |
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| Protein accession | YP_001430759 |
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| Protein GI | 156740630 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.170655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.096585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGAT GCCTGCACGC TATTACGATC ATCTTGCTTA CCGGGTTCAT CCTGTTGCTG
TCATCTTTTG CCCGCGCGCC GCTTGCGAGG GGCGCCGATA GCGCCGTATT CGCGCAACCC
GGCAATCAAC CCGGTCGGGG AACGTCTGCC CTGGGCGATC CGCCTCAACC TGACACACCA
CCGGTAGATG CTGCCACGAA TGCGGGAGCC GGAACCAATG CCACGCCAAC CGAAGCCGTG
CAATCGGCAG TAACGGTGTT TTTACCGCTG ATTGCGCGCC CGCTGCCGCC GCTCCCCGAT
GATTGGTTGG GACGGGTCAA CGGGTACCGC GCGCGCGCAG GCGTGCCGCT CGTATCCGCC
GATGTGACGC TGAACAATAA TTGCTTTGAG CACGCGCGCT ACATGGCGGA GAATAACGAC
TTGACCCACA ATCAGAACCC GTCGCTGCCG TATGCGTCGC CTGCCGGACA GATCTGTGCG
CAGAAGGGGA ATGCGTGGAT GGGATGGGGG GGCGCCTGGC GCCAGCGCGA CGCGATCGAT
GGATGGATGG AGTCGGTTGG GCACCGGCTC TGGCTCCTCT ACCCAACAAC GCCGACATTC
GGGTTCGGAT TCTATAGCAA TGGTCAGCGC AGCGCCGCCG GTCTCGACGT GCTCTCGCGC
GCTCGCTTTG ACGACGATGC TGCGTATGCT GGCTGGCCCG TGCGCTATCC CGCGCCGGGA
CAGCAGGGTG TGCCGGCAAC GCGATACCCC ATCACATTGC AGTGGCCCTA TTTCGATCAG
AAGCCGGTCG TGACCGGAAC GAGTCTGCGC GCTCTGCCGG GAACCGTGCT GGGGCATACG
ACAACGACCG ATCTGCCGGT CAACCATAAG GGTGTTGCTA TCATCCCAAA CCAGGCATTC
CCACCGAATG CGACGATTGA GGTGACGGTC ACCGGCAGTT ATAAGGGGCA ACCGTTCTCG
TTCACCTGGC AATTCCAGAC GGGGAATTAA
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| Protein sequence | MIRCLHAITI ILLTGFILLL SSFARAPLAR GADSAVFAQP GNQPGRGTSA LGDPPQPDTP
PVDAATNAGA GTNATPTEAV QSAVTVFLPL IARPLPPLPD DWLGRVNGYR ARAGVPLVSA
DVTLNNNCFE HARYMAENND LTHNQNPSLP YASPAGQICA QKGNAWMGWG GAWRQRDAID
GWMESVGHRL WLLYPTTPTF GFGFYSNGQR SAAGLDVLSR ARFDDDAAYA GWPVRYPAPG
QQGVPATRYP ITLQWPYFDQ KPVVTGTSLR ALPGTVLGHT TTTDLPVNHK GVAIIPNQAF
PPNATIEVTV TGSYKGQPFS FTWQFQTGN
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