| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0598 |
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| Symbol | |
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| ID | 5538061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 796230 |
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| End bp | 797735 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640892759 |
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| Product | Alpha-N-arabinofuranosidase |
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| Protein accession | YP_001430745 |
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| Protein GI | 156740616 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.832453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCA GACCACCTGC ACGCATCTCC ATCGATGAAG AGCGCGTCAT TGGTCGCATT
TCGCCGCTCC TGTTCGGCGG ATTCATCGAA CATATGGGGC GCTGCGTCTA TCAGGGCGTG
TTCGATCCCG GATCGCCGCT GGCTGATGAC CAGGGGTTCC GCACTGATGT GCTGGCAGCG
CTGCGCGAAC TGAACCTGCG GATCATTCGC TACCCTGGCG GCAATTTTCT GTCTGGCTAT
CACTGGCGTG ATGGTGTGGG ACCGGTCGCA CAGCGTCCGC GTCGCCGCGA ACTGGCGTGG
CAGTCGATTG AAACGAACCG CTTCGGCACA CACGAGTTCA TTGCGTTGTG TCGTATGCTT
GGCGCTGAAC CAATGCTCGG CGTCAACCTG GGGACCGGTA CGATCGAAGA GGCTGGCGCA
TATGTCGAGT ACTGCAACGC TCCAACCGGC ACAATCGAAG CCGATCGGCG AGTTGCGAAC
GGCGCACCGG AGCCGTTTGG CGTGCGCTAC TGGTGTCTTG GCAATGAGAT GGACGGACCC
TGGCAGATCG GTCATATGGA CGCGCACGCT TACGCTGTCA AAGCCCGCGA AGCCGCAAAA
CTGATGAAGT GGCACGATCC GTCGATCCGC CTGACGCTCT GCGGTTCATC GAGCAGCGGT
ATGCCGACCT ATCCCGAATG GGACCGAATT GCGCTCGAAG TGTGCTGGGA GTATGTCGAT
TATCTGTCGC TCCACTTCTA CGCGGGCAAC CGCGATGACG ATACTGACAG TTATCTGGCG
CTGGCGCGCC AGTTCGAGGA GCATCTCGAC GCTCTCGCCG GGACATTGCG CTATGTGAAG
GCAAAGATGC GATCACGTCA TAGTGTCTAT CTGAGCTGGG ATGAGTGGAA TGTGTGGTAC
AAAGACCAGA CAACGCAAGG GGGATGGCGC GAAGCGCCAC ACCTGATCGA GGAGGTGTAC
AACCTGGAAG ACGCACTGGT CGTAGCGCAG TGGCTGAATG TGTTCCTGCG CCGCTGCGAT
GTGCTGAAGA TCGCCTGCCT GGCGCAACTG GTCAATGTTA TCGCGCCCAT TCTGACCCGT
TCTGATGGGT TGATCCGTCA GTCGATCTTC TATCCGTTCG CGCTTTTCAG CCGGTATGCA
ACCGGCGACT CGCTCGACCT GCTCGTCCGG TCGCCGCTAT ATGCCACTCG CGCCTTCGGC
GATCAGCCCC TGATCGACGC AGCAGCCAGC TACGATGCTG AACATGGCAA GGGCGCCATT
TTTGTGGTTC ATCGCGGACA ACATGCGCCG CTAACGGTGA ATCTGGAGTG GCAGGGGCGT
TCGCCACGCC AGATCACGGA GATCTATCAG GTTGCCGGTG ATGATCCAAA AGCCGTCAAT
TCCTTCGAGC GACCCGATGT TATTGGCGTG CGCGCCCTGC CCGGCGCTCC GATCACCGAC
AGGCGGTTCA GCCTGAATCT CCCTCCACTC TCATTGACGG TAGCGCTGGT CGAATGGCCG
ACCTGA
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| Protein sequence | MTTRPPARIS IDEERVIGRI SPLLFGGFIE HMGRCVYQGV FDPGSPLADD QGFRTDVLAA
LRELNLRIIR YPGGNFLSGY HWRDGVGPVA QRPRRRELAW QSIETNRFGT HEFIALCRML
GAEPMLGVNL GTGTIEEAGA YVEYCNAPTG TIEADRRVAN GAPEPFGVRY WCLGNEMDGP
WQIGHMDAHA YAVKAREAAK LMKWHDPSIR LTLCGSSSSG MPTYPEWDRI ALEVCWEYVD
YLSLHFYAGN RDDDTDSYLA LARQFEEHLD ALAGTLRYVK AKMRSRHSVY LSWDEWNVWY
KDQTTQGGWR EAPHLIEEVY NLEDALVVAQ WLNVFLRRCD VLKIACLAQL VNVIAPILTR
SDGLIRQSIF YPFALFSRYA TGDSLDLLVR SPLYATRAFG DQPLIDAAAS YDAEHGKGAI
FVVHRGQHAP LTVNLEWQGR SPRQITEIYQ VAGDDPKAVN SFERPDVIGV RALPGAPITD
RRFSLNLPPL SLTVALVEWP T
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