| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0544 |
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| Symbol | |
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| ID | 5538007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 723354 |
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| End bp | 724235 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892706 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001430692 |
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| Protein GI | 156740563 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAT TCGTGCAACT GACGCTGAGC GGGGTCGCCA ACGGCGCCAT TTTCGCGCTG
GTGGCGCTCG GATTTGTGCT GATCTACAAG AGCAGCGACG TAATCAACTT TGCGCAGGGC
GAGTTGCTGC TGATCGGCGC GTACCTGACG TACACCACCG TAGAGATGAT CGGCTTGTGG
TGGCCTCTTG GCGTGATCGT CGCCGTGGCG CTGGCCGCGC TCGTTGGCGT GCTGATCGAG
CAGATGGTGC TGCGCCCGCT CATTGGCGAG CCGGTCATCT CGGTTATTAT GGTTACTATC
GGGCTATCGT CGTTGCTGCG CGCGATCATC GGCGCGATAT GGGGAGTGAC GCCACGAACG
GCGCCACAGT TCCTTCCCCG CGATACGATC GCGTTGTTCG GCGCCAGCGT CAGCGTGGAT
CGCCTGTGGG CGTTTGCGCT GGCGTTGACC CTCTTTGCCC TGCTGACCCT CTTCTTTCGC
TACAGCCGCG AAGGTATCGC CATGCGCGCC GTTGCGGACG ATCAACAGGC GGCGTTGAGC
ATGGGCATCA GCGTCAAGAA GGTGTGGGCG GTCGCCTGGG CTATTGCCGC TGTGACCGCC
TCGGTTGGCG GCATTCTGTT GATGAGCATC TTCGGCGGCG TCTCCGGGCA GATCGCTCGC
GTCGGATTGC TGGTCTTTCC GGTAGTGATC CTTGGTGGTC TCGACAGCAT TCCGGGCGCG
ATTGTCGGTG GGCTGATCAT CGGGTTGCTC CAATCGTTCG CCGGCGGATA TCTGCCGCCT
GAACTCGGCA TGGGTGAGGT TGCGCCTTTC ATCATTCTGC TTTTCATCCT CCTGATACGC
CCATACGGTC TCTACGGTCA GCGGATCATC GAGCGCGTGT AA
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| Protein sequence | MEKFVQLTLS GVANGAIFAL VALGFVLIYK SSDVINFAQG ELLLIGAYLT YTTVEMIGLW
WPLGVIVAVA LAALVGVLIE QMVLRPLIGE PVISVIMVTI GLSSLLRAII GAIWGVTPRT
APQFLPRDTI ALFGASVSVD RLWAFALALT LFALLTLFFR YSREGIAMRA VADDQQAALS
MGISVKKVWA VAWAIAAVTA SVGGILLMSI FGGVSGQIAR VGLLVFPVVI LGGLDSIPGA
IVGGLIIGLL QSFAGGYLPP ELGMGEVAPF IILLFILLIR PYGLYGQRII ERV
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