| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0457 |
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| Symbol | |
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| ID | 5537920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 581844 |
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| End bp | 583310 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892620 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001430606 |
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| Protein GI | 156740477 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCATC TTGCCACAAC CGTCCTGCGC AATTCCGCCT TTGGTATGGC GTCGCACATT
GCGATGAAAC TGCTTTCGTT CACCTTCTCG GTGCTGATCA TTCGCAACCT TGGAGCGACC
GATTTCGGGC AGTACGCCGC TGTGCTCGGA TTTGGCAGCG TCTTCCTGTT CATTGCCGAC
CTGGGACTCA GCCCGTACAC GGTGCGCGAA GTGGCGCGCC TGCGCGATCA AACCGACGGA
AAGGAGCGCA TTCAGGCGCT CTATGCCGAT GTGTTGATCC TGCGCCTGAT CCTGTCGGTG
ATCGCCGGCA TTCTGGTGGT CAGCGCCGCG ATCCTGACGG GGCGACCGCT CTTGATGATT
GGCGCAATTG CGATTAACTC GCTCACCGTG CTGATCTACG CCGTCCACGG TAGTTCCGAA
GCAGTATTGT CGGGGTATGA ACGGCTCGAT CTGGTATCGG GCATGCAGGT TGTCAATCAA
CTGGCGTTCG TGACAATCGG CGGGCTGGCG CTCTGGTTGG GGTTTGGCTA CTATGGCCTG
ATCGTCGCCA CGATGATCGG CGTCACGCTG ATGACGGCGC TGGTGGTGCG CGCCGTTCTG
CGCCTTGGCG TTCGCCCCGG TCGCATCACC TGGCGGCGCT GGCTGCCGCT GCTGCGCGCC
GCGCTTCCAT TTGGCATTAT TGGTCTGACG CTCGGCATTT CGTACCGCTT CGACACGGTG
CTGCTCAATA TCTACGGCGG TGATGCTGTC ACCGGGCATT ACAACGCGGC ATATAACCTG
ATCTTCTCGC TGGTGACGCT GTCGAATGTG CTCAATACTG CGCTGTATCC GTCGCTGTCG
CGGCAGTCGA TAACGGCGCC GGAGACGTTG CCGCTGGTGT ACGAACGGGT GTTGCGCTAT
CTGATGTTGG TGGCATTGCC CATCGCCGTC GGCGGTTTTA TTGTCGCTGC GCCGTTGATC
GGGCTGCTGT TCGGCGCCGA TTATGCGCCC GCAGCGCCGT TGTTTGCCAT CCTGATCTGG
GTGTTGCCGT TGATGTTCCT GTCGGAATTT CTCGGCTATG TGGTTGTCAT CGCCGGGCGC
GAGGCGCTGG TGGCGCGGTC GATCATTGTC AGCAGCAGTA TCAACGTTGT CGCCAACCTG
ATCTTTATTC CAATCTATGG CGTGCTTGCG GCGGCTGTGA TTACAGTTAT CACCGAGGCA
GTGCTGGTTA TTCAGTATGT CTGGTTGGTG CGTGACTTGC TGGGTCGAAT GCAGTGGGGC
GCCCTTCTCC GCGTCGCACT GGCAGTTGTG GCAATGGCAG CGCTGGTCTA TCTGGCGCGC
AGCCTTCCGG TGCTGGCGAC AGTTGCCCTT GGCGGTGCGC TGTATGGCGG GTTGTTGCTG
GCGATGCGCG TTGTTGGACC GGACGAGGCG GCGTTTGTGC GAGGAGTCCT TACGGCGCGA
CGCGCGTCGG CGGGAGGTCA TTCCTGA
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| Protein sequence | MNHLATTVLR NSAFGMASHI AMKLLSFTFS VLIIRNLGAT DFGQYAAVLG FGSVFLFIAD
LGLSPYTVRE VARLRDQTDG KERIQALYAD VLILRLILSV IAGILVVSAA ILTGRPLLMI
GAIAINSLTV LIYAVHGSSE AVLSGYERLD LVSGMQVVNQ LAFVTIGGLA LWLGFGYYGL
IVATMIGVTL MTALVVRAVL RLGVRPGRIT WRRWLPLLRA ALPFGIIGLT LGISYRFDTV
LLNIYGGDAV TGHYNAAYNL IFSLVTLSNV LNTALYPSLS RQSITAPETL PLVYERVLRY
LMLVALPIAV GGFIVAAPLI GLLFGADYAP AAPLFAILIW VLPLMFLSEF LGYVVVIAGR
EALVARSIIV SSSINVVANL IFIPIYGVLA AAVITVITEA VLVIQYVWLV RDLLGRMQWG
ALLRVALAVV AMAALVYLAR SLPVLATVAL GGALYGGLLL AMRVVGPDEA AFVRGVLTAR
RASAGGHS
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